Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.85□□□□□ -1.47
COL3A1P02461 BTF3P10-201ENST00000433415 495 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 RPS15AP29-201ENST00000445539 400 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 TPT1P1-201ENST00000458495 518 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AL133372.1-201ENST00000493565 745 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.85□□□□□ -1.47
COL3A1P02461 MORF4L2P1-201ENST00000503761 858 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AC027338.1-201ENST00000514840 825 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AC068339.2-201ENST00000534395 618 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 TOMM20P2-201ENST00000540082 421 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 AC125611.1-201ENST00000549563 229 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.85□□□□□ -1.47
COL3A1P02461 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.85□□□□□ -1.47
COL3A1P02461 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 AL162233.1-201ENST00000620014 944 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AC140113.4-201ENST00000622087 222 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AC008013.2-202ENST00000637965 364 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 LINC01808-202ENST00000641680 1116 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.85□□□□□ -1.47
COL3A1P02461 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL3A1P02461 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL3A1P02461 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 HSPD1P14-201ENST00000432666 1618 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 AL672167.1-203ENST00000641299 2975 ntBASIC5.85□□□□□ -1.47
COL3A1P02461 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL3A1P02461 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL3A1P02461 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL3A1P02461 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 AL161909.1-201ENST00000397390 712 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.84□□□□□ -1.47
COL3A1P02461 MFSD13B-201ENST00000420133 1290 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.84□□□□□ -1.47
COL3A1P02461 AC004854.1-201ENST00000440356 349 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 KATNBL1P3-201ENST00000443475 909 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.84□□□□□ -1.47
COL3A1P02461 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.84□□□□□ -1.47
COL3A1P02461 RPL7AP28-201ENST00000464513 571 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 RN7SL817P-201ENST00000480777 288 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 RPL35P6-201ENST00000490024 372 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.84□□□□□ -1.47
COL3A1P02461 AC108475.1-201ENST00000507880 950 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC093840.1-201ENST00000511599 336 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.84□□□□□ -1.47
COL3A1P02461 RN7SKP265-201ENST00000516448 223 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 RN7SKP287-201ENST00000516546 266 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.84□□□□□ -1.47
COL3A1P02461 AC009852.2-201ENST00000567898 485 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 AP001094.1-201ENST00000579805 193 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 AL590392.1-201ENST00000604960 446 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC093424.1-201ENST00000604999 338 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC080013.6-201ENST00000606185 215 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC091979.2-201ENST00000607514 214 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.84□□□□□ -1.47
COL3A1P02461 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
COL3A1P02461 AL445567.2-201ENST00000618935 498 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 AC010480.1-201ENST00000624823 684 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 FP325313.1-201ENST00000638228 703 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 AL158163.1-201ENST00000603915 1649 ntBASIC5.84□□□□□ -1.47
COL3A1P02461 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
COL3A1P02461 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL3A1P02461 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
COL3A1P02461 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
COL3A1P02461 RNU1-132P-201ENST00000364300 164 ntBASIC5.83□□□□□ -1.48
COL3A1P02461 RNA5SP366-201ENST00000365454 123 ntBASIC5.83□□□□□ -1.48
COL3A1P02461 MORF4L1P6-201ENST00000418771 268 ntBASIC5.83□□□□□ -1.48
COL3A1P02461 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.83□□□□□ -1.48
COL3A1P02461 NPM1P33-201ENST00000438918 872 ntBASIC5.83□□□□□ -1.48
COL3A1P02461 CLIC4P1-201ENST00000453177 535 ntBASIC5.83□□□□□ -1.48
COL3A1P02461 DUXAP8-207ENST00000456786 622 ntBASIC5.83□□□□□ -1.48
COL3A1P02461 AC008958.1-201ENST00000511047 682 ntBASIC5.83□□□□□ -1.48
COL3A1P02461 RNA5SP464-201ENST00000516251 108 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms