Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 HSPA8P19-201ENST00000505359 1517 ntBASIC4.78□□□□□ -1.64
LDLRP01130 THAP12P4-201ENST00000528321 2266 ntBASIC4.78□□□□□ -1.64
LDLRP01130 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 NXF4-202ENST00000416098 1465 ntBASIC4.78□□□□□ -1.64
LDLRP01130 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 SNURFL-201ENST00000309296 343 ntBASIC4.78□□□□□ -1.64
LDLRP01130 RN7SKP113-201ENST00000363891 295 ntBASIC4.78□□□□□ -1.64
LDLRP01130 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 MIR105-1-201ENST00000385222 81 ntBASIC4.78□□□□□ -1.64
LDLRP01130 HMGB1P10-201ENST00000395823 563 ntBASIC4.78□□□□□ -1.64
LDLRP01130 ATF1P1-201ENST00000406040 927 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC010385.1-201ENST00000412374 256 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 BX664727.1-201ENST00000416024 466 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRP01130 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRP01130 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRP01130 AC008072.1-201ENST00000434254 824 ntBASIC4.78□□□□□ -1.64
LDLRP01130 TMX2P1-201ENST00000436507 708 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRP01130 PTMAP3-201ENST00000447474 330 ntBASIC4.78□□□□□ -1.64
LDLRP01130 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 RPL10P17-201ENST00000453852 316 ntBASIC4.78□□□□□ -1.64
LDLRP01130 Z92846.1-201ENST00000456203 268 ntBASIC4.78□□□□□ -1.64
LDLRP01130 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 CYCSP20-201ENST00000473154 315 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC133963.2-201ENST00000513686 578 ntBASIC4.78□□□□□ -1.64
LDLRP01130 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 RNA5SP464-201ENST00000516251 108 ntBASIC4.78□□□□□ -1.64
LDLRP01130 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRP01130 AC005868.1-201ENST00000536421 331 ntBASIC4.78□□□□□ -1.64
LDLRP01130 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.78□□□□□ -1.64
LDLRP01130 AC116553.2-201ENST00000564203 463 ntBASIC4.78□□□□□ -1.64
LDLRP01130 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.78□□□□□ -1.64
LDLRP01130 CYCSP40-201ENST00000575927 294 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.78□□□□□ -1.64
LDLRP01130 SS18L2P2-201ENST00000583960 235 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC006116.5-201ENST00000591936 559 ntBASIC4.78□□□□□ -1.64
LDLRP01130 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.78□□□□□ -1.64
LDLRP01130 AC068620.3-201ENST00000602749 560 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC096947.1-201ENST00000603233 470 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 AC097504.2-201ENST00000608088 454 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC083809.1-201ENST00000615051 472 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRP01130 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 AC112694.2-201ENST00000623697 768 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC009039.2-201ENST00000624524 529 ntBASIC4.78□□□□□ -1.64
LDLRP01130 AC016717.3-201ENST00000624730 554 ntBASIC4.78□□□□□ -1.64
LDLRP01130 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LDLRP01130 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDLRP01130 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LDLRP01130 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LDLRP01130 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LDLRP01130 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 RNU6-481P-201ENST00000384194 107 ntBASIC4.77□□□□□ -1.65
LDLRP01130 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LDLRP01130 RPS16P5-201ENST00000406501 404 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AL445183.3-201ENST00000414168 502 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.77□□□□□ -1.65
LDLRP01130 AL590609.2-201ENST00000421430 368 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.77□□□□□ -1.65
LDLRP01130 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.77□□□□□ -1.65
LDLRP01130 AL117351.1-201ENST00000438864 766 ntBASIC4.77□□□□□ -1.65
LDLRP01130 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.77□□□□□ -1.65
LDLRP01130 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.77□□□□□ -1.65
LDLRP01130 RPS27P5-201ENST00000444247 244 ntBASIC4.77□□□□□ -1.65
LDLRP01130 MTCYBP11-201ENST00000447254 1109 ntBASIC4.77□□□□□ -1.65
LDLRP01130 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.77□□□□□ -1.65
LDLRP01130 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 AC092647.2-201ENST00000452998 253 ntBASIC4.77□□□□□ -1.65
LDLRP01130 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDLRP01130 NDUFA12P1-201ENST00000455914 406 ntBASIC4.77□□□□□ -1.65
LDLRP01130 SETP6-201ENST00000479329 568 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.77□□□□□ -1.65
LDLRP01130 RNU5A-7P-201ENST00000515979 116 ntBASIC4.77□□□□□ -1.65
LDLRP01130 RN7SKP141-201ENST00000516167 338 ntBASIC4.77□□□□□ -1.65
LDLRP01130 snoU109.6-201ENST00000516831 118 ntBASIC4.77□□□□□ -1.65
LDLRP01130 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.77□□□□□ -1.65
LDLRP01130 BUD31P1-201ENST00000521828 359 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.77□□□□□ -1.65
LDLRP01130 OR5AN2P-201ENST00000534535 896 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.77□□□□□ -1.65
LDLRP01130 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms