Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SGCEO43556 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4□□□□□ -1.77
SGCEO43556 AP001002.1-201ENST00000625148 1513 ntBASIC4□□□□□ -1.77
SGCEO43556 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SGCEO43556 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4□□□□□ -1.77
SGCEO43556 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SGCEO43556 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4□□□□□ -1.77
SGCEO43556 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4□□□□□ -1.77
SGCEO43556 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4□□□□□ -1.77
SGCEO43556 MIR3074-201ENST00000384885 81 ntBASIC4□□□□□ -1.77
SGCEO43556 MT-TP-201ENST00000387461 68 ntBASIC4□□□□□ -1.77
SGCEO43556 AL034374.1-201ENST00000406329 351 ntBASIC4□□□□□ -1.77
SGCEO43556 MTCYBP7-201ENST00000419540 1134 ntBASIC4□□□□□ -1.77
SGCEO43556 AL360081.1-201ENST00000428299 555 ntBASIC4□□□□□ -1.77
SGCEO43556 RPL21P91-201ENST00000429231 479 ntBASIC4□□□□□ -1.77
SGCEO43556 RPL23AP25-201ENST00000430973 463 ntBASIC4□□□□□ -1.77
SGCEO43556 RPL7P28-201ENST00000437739 740 ntBASIC4□□□□□ -1.77
SGCEO43556 NDUFS5P3-201ENST00000450668 321 ntBASIC4□□□□□ -1.77
SGCEO43556 CALM1P2-201ENST00000452941 448 ntBASIC4□□□□□ -1.77
SGCEO43556 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4□□□□□ -1.77
SGCEO43556 AL133477.1-201ENST00000457472 514 ntBASIC4□□□□□ -1.77
SGCEO43556 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4□□□□□ -1.77
SGCEO43556 METTL15P1-201ENST00000481421 1045 ntBASIC4□□□□□ -1.77
SGCEO43556 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4□□□□□ -1.77
SGCEO43556 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4□□□□□ -1.77
SGCEO43556 MTND4LP2-201ENST00000502312 285 ntBASIC4□□□□□ -1.77
SGCEO43556 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4□□□□□ -1.77
SGCEO43556 RNU6-319P-201ENST00000516025 108 ntBASIC4□□□□□ -1.77
SGCEO43556 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4□□□□□ -1.77
SGCEO43556 AC135001.1-201ENST00000544546 283 ntBASIC4□□□□□ -1.77
SGCEO43556 AL352979.3-201ENST00000553515 247 ntBASIC4□□□□□ -1.77
SGCEO43556 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4□□□□□ -1.77
SGCEO43556 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4□□□□□ -1.77
SGCEO43556 AL121834.1-201ENST00000572284 509 ntBASIC4□□□□□ -1.77
SGCEO43556 AC073091.2-201ENST00000603205 907 ntBASIC4□□□□□ -1.77
SGCEO43556 AC023762.1-201ENST00000603280 584 ntBASIC4□□□□□ -1.77
SGCEO43556 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4□□□□□ -1.77
SGCEO43556 AC091953.3-201ENST00000623220 236 ntBASIC4□□□□□ -1.77
SGCEO43556 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 AC008725.1-201ENST00000605123 2263 ntBASIC4□□□□□ -1.77
SGCEO43556 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SGCEO43556 AC010300.1-201ENST00000600671 5134 ntBASIC4□□□□□ -1.77
SGCEO43556 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SGCEO43556 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.99□□□□□ -1.77
SGCEO43556 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SGCEO43556 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 RN7SKP103-201ENST00000363848 320 ntBASIC3.99□□□□□ -1.77
SGCEO43556 SNORD74.4-201ENST00000364129 80 ntBASIC3.99□□□□□ -1.77
SGCEO43556 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SGCEO43556 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SGCEO43556 AL035419.1-201ENST00000397037 564 ntBASIC3.99□□□□□ -1.77
SGCEO43556 SDHCP2-201ENST00000398565 501 ntBASIC3.99□□□□□ -1.77
SGCEO43556 OR1F12-201ENST00000402365 945 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AL133270.1-201ENST00000402635 279 ntBASIC3.99□□□□□ -1.77
SGCEO43556 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.99□□□□□ -1.77
SGCEO43556 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.99□□□□□ -1.77
SGCEO43556 RWDD4P2-201ENST00000426392 563 ntBASIC3.99□□□□□ -1.77
SGCEO43556 BRWD1P3-201ENST00000428816 390 ntBASIC3.99□□□□□ -1.77
SGCEO43556 CACYBPP1-201ENST00000438592 684 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AC006466.1-201ENST00000438721 289 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.99□□□□□ -1.77
SGCEO43556 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.99□□□□□ -1.77
SGCEO43556 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.99□□□□□ -1.77
SGCEO43556 RPS26P28-201ENST00000470806 348 ntBASIC3.99□□□□□ -1.77
SGCEO43556 LARP7P4-201ENST00000481075 878 ntBASIC3.99□□□□□ -1.77
SGCEO43556 RWDD4P1-201ENST00000488019 565 ntBASIC3.99□□□□□ -1.77
SGCEO43556 RN7SL205P-201ENST00000490174 284 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.99□□□□□ -1.77
SGCEO43556 AC105233.1-201ENST00000498840 781 ntBASIC3.99□□□□□ -1.77
SGCEO43556 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 OR5M2P-201ENST00000529003 936 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.99□□□□□ -1.77
SGCEO43556 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SGCEO43556 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.99□□□□□ -1.77
SGCEO43556 AC069240.1-201ENST00000548774 375 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 AC027455.1-201ENST00000574104 594 ntBASIC3.99□□□□□ -1.77
SGCEO43556 MIR4270-201ENST00000581799 70 ntBASIC3.99□□□□□ -1.77
SGCEO43556 MIR4480-201ENST00000582492 71 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 MIR7154-201ENST00000620673 73 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AC091905.2-201ENST00000623143 306 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AC145207.9-201ENST00000623802 325 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AP001784.1-201ENST00000624107 428 ntBASIC3.99□□□□□ -1.77
SGCEO43556 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.99□□□□□ -1.77
SGCEO43556 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SGCEO43556 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
SGCEO43556 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SGCEO43556 EOGT-210ENST00000615922 1931 ntBASIC3.99□□□□□ -1.77
SGCEO43556 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms