Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXN3O00409 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 AL136310.1-201ENST00000404926 654 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 DUTP5-201ENST00000406790 469 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 OR4K6P-201ENST00000416478 897 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC234782.4-201ENST00000417646 1048 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 SLC35E1P1-201ENST00000419313 864 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXN3O00409 GAPDHP49-201ENST00000421421 961 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXN3O00409 HMGN2P27-201ENST00000427352 270 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXN3O00409 DYNLL1P7-201ENST00000429273 258 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 NANOGP2-201ENST00000435391 727 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 TMX2P1-201ENST00000436507 708 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 MTND6P18-201ENST00000439477 513 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 PTENP1-201ENST00000447117 1215 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC112492.1-201ENST00000449607 712 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXN3O00409 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXN3O00409 AC009127.1-201ENST00000467090 155 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 RPL23AP71-201ENST00000470966 469 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.49□□□□□ -1.53
FOXN3O00409 RPL7P39-201ENST00000481157 744 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC004815.1-201ENST00000484185 331 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXN3O00409 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXN3O00409 MTND2P38-201ENST00000522536 667 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXN3O00409 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 AC068993.1-201ENST00000546724 589 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC006349.1-201ENST00000555526 235 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.49□□□□□ -1.53
FOXN3O00409 AC015688.2-201ENST00000584523 262 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC115085.1-201ENST00000588924 229 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 CCDC58P3-201ENST00000590792 430 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC010503.3-201ENST00000594355 540 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 GAS5-AS1-201ENST00000602767 694 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 IMMP1LP3-201ENST00000604197 224 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC018695.5-201ENST00000605872 315 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 AC092608.3-201ENST00000625017 386 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.49□□□□□ -1.53
FOXN3O00409 AC090897.3-201ENST00000636973 1157 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FOXN3O00409 CASC19-221ENST00000641309 1382 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXN3O00409 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
FOXN3O00409 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.48□□□□□ -1.53
FOXN3O00409 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
FOXN3O00409 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.48□□□□□ -1.53
FOXN3O00409 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXN3O00409 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXN3O00409 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.48□□□□□ -1.53
FOXN3O00409 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
FOXN3O00409 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
FOXN3O00409 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
FOXN3O00409 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
FOXN3O00409 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.48□□□□□ -1.53
FOXN3O00409 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXN3O00409 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
FOXN3O00409 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
FOXN3O00409 RNU4-51P-201ENST00000364206 140 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 OR1L1-202ENST00000373686 1083 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXN3O00409 SNORA2.3-201ENST00000383920 135 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 AC093719.1-202ENST00000392735 373 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 AC013442.1-201ENST00000397347 228 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 RNU2-50P-201ENST00000410494 143 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 AC073069.1-201ENST00000428657 441 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 COX6CP13-201ENST00000428703 226 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 MTATP6P26-201ENST00000445926 662 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 RHEBP2-201ENST00000450289 600 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 AL161747.1-201ENST00000480068 358 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.48□□□□□ -1.53
FOXN3O00409 ATP5LP3-201ENST00000514223 304 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 RNU6-416P-201ENST00000516265 103 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 RN7SKP283-201ENST00000517197 270 ntBASIC5.48□□□□□ -1.53
FOXN3O00409 AC023632.1-201ENST00000518463 375 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms