Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC091046.3-201ENST00000631455 1574 ntBASIC4.92□□□□□ -1.62
O00370 AC017104.4-201ENST00000636283 1592 ntBASIC4.92□□□□□ -1.62
O00370 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
O00370 EOGT-210ENST00000615922 1931 ntBASIC4.92□□□□□ -1.62
O00370 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
O00370 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
O00370 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
O00370 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
O00370 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
O00370 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.92□□□□□ -1.62
O00370 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.92□□□□□ -1.62
O00370 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.92□□□□□ -1.62
O00370 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.92□□□□□ -1.62
O00370 AL513533.1-201ENST00000453728 415 ntBASIC4.92□□□□□ -1.62
O00370 MTND2P30-201ENST00000456663 382 ntBASIC4.92□□□□□ -1.62
O00370 RPL7AP52-201ENST00000458096 790 ntBASIC4.92□□□□□ -1.62
O00370 RPS23P1-201ENST00000491662 432 ntBASIC4.92□□□□□ -1.62
O00370 MTND4LP2-201ENST00000502312 285 ntBASIC4.92□□□□□ -1.62
O00370 AC025768.1-201ENST00000510057 267 ntBASIC4.92□□□□□ -1.62
O00370 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.92□□□□□ -1.62
O00370 AC007016.1-201ENST00000512110 244 ntBASIC4.92□□□□□ -1.62
O00370 MTND1P36-201ENST00000522384 936 ntBASIC4.92□□□□□ -1.62
O00370 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.92□□□□□ -1.62
O00370 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.92□□□□□ -1.62
O00370 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
O00370 AC068714.1-201ENST00000559623 800 ntBASIC4.92□□□□□ -1.62
O00370 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.92□□□□□ -1.62
O00370 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.92□□□□□ -1.62
O00370 AL161616.1-201ENST00000611867 286 ntBASIC4.92□□□□□ -1.62
O00370 AL512506.1-201ENST00000613918 449 ntBASIC4.92□□□□□ -1.62
O00370 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.92□□□□□ -1.62
O00370 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.92□□□□□ -1.62
O00370 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.92□□□□□ -1.62
O00370 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
O00370 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
O00370 KARSP3-201ENST00000571212 1504 ntBASIC4.92□□□□□ -1.62
O00370 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
O00370 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.91□□□□□ -1.62
O00370 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.91□□□□□ -1.62
O00370 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 AL049697.2-201ENST00000403708 294 ntBASIC4.91□□□□□ -1.62
O00370 RN7SKP222-201ENST00000410651 315 ntBASIC4.91□□□□□ -1.62
O00370 RN7SKP106-201ENST00000410832 272 ntBASIC4.91□□□□□ -1.62
O00370 RN7SKP247-201ENST00000411094 308 ntBASIC4.91□□□□□ -1.62
O00370 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.91□□□□□ -1.62
O00370 GTF2IP2-201ENST00000424290 697 ntBASIC4.91□□□□□ -1.62
O00370 EIF2S2P3-201ENST00000428356 999 ntBASIC4.91□□□□□ -1.62
O00370 RPS20P1-201ENST00000434853 354 ntBASIC4.91□□□□□ -1.62
O00370 ELOCP10-201ENST00000440624 327 ntBASIC4.91□□□□□ -1.62
O00370 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.91□□□□□ -1.62
O00370 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.91□□□□□ -1.62
O00370 SCARNA10-201ENST00000459255 330 ntBASIC4.91□□□□□ -1.62
O00370 RN7SL41P-201ENST00000476144 297 ntBASIC4.91□□□□□ -1.62
O00370 OR9N1P-202ENST00000494289 481 ntBASIC4.91□□□□□ -1.62
O00370 AC098799.3-201ENST00000506095 438 ntBASIC4.91□□□□□ -1.62
O00370 MTND3P24-201ENST00000506306 329 ntBASIC4.91□□□□□ -1.62
O00370 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.91□□□□□ -1.62
O00370 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.91□□□□□ -1.62
O00370 MTCYBP19-201ENST00000517463 1124 ntBASIC4.91□□□□□ -1.62
O00370 CYCSP28-201ENST00000534284 321 ntBASIC4.91□□□□□ -1.62
O00370 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.91□□□□□ -1.62
O00370 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.91□□□□□ -1.62
O00370 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.91□□□□□ -1.62
O00370 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.91□□□□□ -1.62
O00370 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.91□□□□□ -1.62
O00370 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.91□□□□□ -1.62
O00370 ELOCP34-201ENST00000604436 327 ntBASIC4.91□□□□□ -1.62
O00370 AC009237.17-201ENST00000618111 748 ntBASIC4.91□□□□□ -1.62
O00370 MIR7703-201ENST00000620784 77 ntBASIC4.91□□□□□ -1.62
O00370 AP003400.6-201ENST00000624698 740 ntBASIC4.91□□□□□ -1.62
O00370 AC019080.5-201ENST00000624891 757 ntBASIC4.91□□□□□ -1.62
O00370 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.91□□□□□ -1.62
O00370 U3.53-201ENST00000628922 216 ntBASIC4.91□□□□□ -1.62
O00370 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.91□□□□□ -1.62
O00370 CASC19-204ENST00000641001 2055 ntBASIC4.91□□□□□ -1.62
O00370 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 ZNF137P-201ENST00000456718 1920 ntBASIC4.91□□□□□ -1.62
O00370 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 AP001002.1-201ENST00000625148 1513 ntBASIC4.91□□□□□ -1.62
O00370 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 MAPK10-303ENST00000641324 3959 ntBASIC4.91□□□□□ -1.62
O00370 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
O00370 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
O00370 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
O00370 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.9□□□□□ -1.62
O00370 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
O00370 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
O00370 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.9□□□□□ -1.62
O00370 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.9□□□□□ -1.62
O00370 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.9□□□□□ -1.62
O00370 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
O00370 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.9□□□□□ -1.62
O00370 OR56B2P-201ENST00000317102 954 ntBASIC4.9□□□□□ -1.63
O00370 RNU1-108P-201ENST00000362556 161 ntBASIC4.9□□□□□ -1.63
O00370 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
O00370 RNA5SP397-201ENST00000391323 118 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms