Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AC068446.3-201ENST00000555285 382 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AL049839.1-201ENST00000556151 657 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 NPM1P47-201ENST00000560843 856 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AC022726.1-201ENST00000587475 207 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AC068790.4-201ENST00000602474 263 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AC010424.2-201ENST00000607594 443 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 MIR6810-201ENST00000622701 70 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AC007342.8-201ENST00000623278 678 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AC008758.3-201ENST00000507003 1829 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 AC009643.2-201ENST00000603543 1448 ntBASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPIPA2E9PIF3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RNA5SP332-201ENST00000391063 115 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 HSPD1P16-201ENST00000402302 394 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RSU1P3-201ENST00000412878 835 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RPS20P1-201ENST00000434853 354 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 ELOCP3-201ENST00000439303 348 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 MTND5P8-201ENST00000449817 1083 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RPS5P7-201ENST00000456664 608 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RN7SKP92-201ENST00000517266 244 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC005868.1-201ENST00000536421 331 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 NOP56P3-201ENST00000549457 385 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC209154.1-201ENST00000582156 337 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 MTCO3P22-201ENST00000603219 784 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC012557.1-201ENST00000607115 611 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AL023583.1-201ENST00000607518 1143 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC016957.2-201ENST00000616998 848 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AL022401.1-201ENST00000619498 108 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AL356490.1-201ENST00000623079 479 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AC006453.5-201ENST00000636451 619 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 DDX18P5-201ENST00000534547 1306 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 TLK1P1-201ENST00000456760 2440 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 AL445487.1-201ENST00000415694 1580 ntBASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA2E9PIF3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC010300.1-201ENST00000600671 5134 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 Z86062.1-201ENST00000406773 777 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 RPL12P46-201ENST00000436610 195 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC016831.4-201ENST00000438302 307 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 XKRY2-201ENST00000442362 1093 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 HMGB1P26-201ENST00000452520 628 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 snoU13.1-201ENST00000459157 104 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 PPIAP21-201ENST00000464473 501 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC073358.1-201ENST00000505671 684 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC111000.3-201ENST00000508057 576 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 HPRT1P1-201ENST00000509498 657 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms