Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 MIR7853-201ENST00000584820 132 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC079315.1-201ENST00000602952 623 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC100767.2-201ENST00000604840 693 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC090525.3-201ENST00000605601 189 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC245297.2-201ENST00000610119 565 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 MIR6809-201ENST00000612189 116 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AL049536.1-201ENST00000625043 744 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 KARSP3-201ENST00000571212 1504 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL355852.1-201ENST00000454081 1771 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 IFIT1P1-201ENST00000400497 1449 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 RNU6-931P-201ENST00000363850 107 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 SNORA62.2-201ENST00000364672 152 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 SNORA51.9-201ENST00000384295 124 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 Y_RNA.560-201ENST00000384689 102 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 FABP12P1-201ENST00000401911 322 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 RNF10P1-201ENST00000418589 369 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 MRPS36P1-201ENST00000421291 307 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 GAPDHP49-201ENST00000421421 961 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC113412.1-201ENST00000425840 504 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL353706.1-201ENST00000436728 494 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 MTND1P27-201ENST00000451117 902 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 VN1R32P-201ENST00000452234 905 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 NDUFA12P1-201ENST00000455914 406 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 TRBV8-2-201ENST00000475637 270 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AP002884.1-201ENST00000479691 655 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC074255.1-201ENST00000511259 501 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC008494.2-201ENST00000514544 370 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC137627.1-201ENST00000545761 289 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 RPA2P1-201ENST00000556557 721 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC090236.2-201ENST00000587933 1101 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AF131215.7-201ENST00000602443 707 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL592221.1-201ENST00000605266 382 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC103591.3-201ENST00000608684 209 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC091932.2-201ENST00000623014 291 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AL392088.2-201ENST00000637607 285 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC093311.1-201ENST00000506586 2021 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 AC000123.3-201ENST00000624029 4975 ntBASIC6.03□□□□□ -1.44
CCDC66A2RUB6 NCLP2-201ENST00000416078 1462 ntBASIC6.02□□□□□ -1.44
CCDC66A2RUB6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.02□□□□□ -1.44
CCDC66A2RUB6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 AL034370.1-201ENST00000397254 1590 ntBASIC6.02□□□□□ -1.45
CCDC66A2RUB6 MUC2-202ENST00000613187 4845 ntBASIC6.02□□□□□ -1.45
CCDC66A2RUB6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 AC092681.1-201ENST00000297369 291 ntBASIC6.02□□□□□ -1.45
CCDC66A2RUB6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 AC023490.2-201ENST00000359859 470 ntBASIC6.02□□□□□ -1.45
CCDC66A2RUB6 RNA5SP433-201ENST00000364491 114 ntBASIC6.02□□□□□ -1.45
CCDC66A2RUB6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC66A2RUB6 AL078599.1-201ENST00000402075 293 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms