Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC093535.2-201ENST00000624769 2326 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 UBE2V1P9-201ENST00000414760 368 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 TNPO1P1-201ENST00000423641 1138 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 SRSF1P1-201ENST00000424058 520 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 CKS1BP6-201ENST00000424932 240 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 COX6CP13-201ENST00000428703 226 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 USP9YP24-201ENST00000434374 697 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 CR769776.1-201ENST00000441254 787 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 VN1R25P-201ENST00000443385 738 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 USP9YP17-201ENST00000444617 696 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 OR6K5P-201ENST00000447050 945 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC105399.1-202ENST00000447303 205 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AL445669.2-201ENST00000454425 421 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC092155.2-201ENST00000454675 477 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 TPTE2P5-203ENST00000458118 728 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 STRADBP1-201ENST00000478954 1281 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 UBA52P7-201ENST00000486088 380 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 RN7SL30P-201ENST00000488416 306 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC231760.1-201ENST00000498002 260 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC093752.1-206ENST00000511823 336 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC133963.2-201ENST00000513686 578 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AP004607.2-201ENST00000533949 322 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 YWHABP2-201ENST00000540201 713 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC004825.1-201ENST00000555068 586 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AL049872.1-201ENST00000556323 322 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC027455.1-201ENST00000574104 594 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC008814.1-201ENST00000603797 406 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC069304.3-201ENST00000603938 1084 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC104985.3-201ENST00000623479 597 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 BX649567.1-201ENST00000642071 1134 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AL359715.4-201ENST00000606629 1436 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 AC008432.1-201ENST00000615912 1320 ntBASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGB1Q9Y5G3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 DDX18P3-201ENST00000404856 2007 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 CASC19-204ENST00000641001 2055 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 RN7SKP115-201ENST00000363177 317 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 SNORD116-8-201ENST00000384365 95 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 RNU6-1242P-201ENST00000391052 103 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 TAF9BP2-201ENST00000400856 499 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL049545.1-201ENST00000401856 572 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 MIR1286-201ENST00000408112 78 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 OR6E1P-201ENST00000414424 923 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 LIPT1P1-201ENST00000415870 1186 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 BMS1P17-202ENST00000416720 316 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL449283.1-202ENST00000418249 604 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL358176.3-201ENST00000420757 454 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms