Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC062016.2-201ENST00000420950 676 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 RSL24D1P6-201ENST00000426934 401 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AL035551.1-201ENST00000446931 348 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AC012671.1-201ENST00000451912 203 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AL161747.1-201ENST00000480068 358 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AC020915.5-201ENST00000596836 964 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 RPL7P50-201ENST00000600588 727 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AP005019.3-201ENST00000620418 560 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 AC015908.5-201ENST00000623289 343 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 Z98755.1-201ENST00000407015 1384 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 SCN1A-220ENST00000641603 12506 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 OR56B2P-202ENST00000641377 2453 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AL592148.3-201ENST00000608771 2646 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 RPL21P108-201ENST00000413857 481 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 CENPIP1-201ENST00000425713 902 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AP001324.1-201ENST00000428553 399 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 NDUFA5P1-201ENST00000433858 341 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 RPL23AP43-201ENST00000446445 471 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 ARL2BPP10-201ENST00000446487 531 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AC027455.1-201ENST00000574104 594 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 MIR4277-201ENST00000578298 84 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AL590392.1-201ENST00000604960 446 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 AC139769.1-204ENST00000472297 1931 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 NXPH1-205ENST00000602349 1953 ntBASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CTNNA3Q9UI47 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 NEAT1-202ENST00000501122 22743 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 RNU1-20P-201ENST00000363314 162 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 MIR659-201ENST00000384963 97 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 HDGFP1-201ENST00000405943 252 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 CEACAMP8-201ENST00000413902 580 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AC006065.1-201ENST00000422539 802 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 GTF2IP2-201ENST00000424290 697 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 FHP1-201ENST00000442741 703 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 RN7SKP122-201ENST00000515923 296 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AC084783.1-201ENST00000565846 910 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AC093765.1-201ENST00000603758 881 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AL445423.1-201ENST00000609941 536 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AL158196.1-201ENST00000616786 434 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 AC009237.17-201ENST00000618111 748 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 MIR6830-201ENST00000636015 70 ntBASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA3Q9UI47 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA3Q9UI47 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms