Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 VN1R85P-201ENST00000601587 426 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC026979.4-201ENST00000606555 645 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC024941.1-201ENST00000612250 334 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC023509.5-201ENST00000617434 807 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 MIR8059-201ENST00000620427 81 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 VPS35P1-201ENST00000563400 1518 ntBASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 COX6CP15-201ENST00000426313 211 ntBASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 HMGB1P23-201ENST00000518743 568 ntBASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 BNIP3P33-201ENST00000598912 569 ntBASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 AC022960.2-201ENST00000616300 666 ntBASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 AL022311.1-201ENST00000623726 19416 ntBASIC5.78□□□□□ -1.48
NPC1L1Q9UHC9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 AC067945.1-201ENST00000342609 618 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 MIR383-201ENST00000362257 73 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 MIR134-201ENST00000385258 73 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 RNA5SP36-201ENST00000410197 133 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 RN7SKP199-201ENST00000410325 305 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 RN7SKP33-201ENST00000410942 340 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 MTCO1P35-201ENST00000515270 228 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 AC105233.3-201ENST00000531125 744 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 OR7M1P-201ENST00000608946 533 ntBASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NPC1L1Q9UHC9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 IQCB2P-201ENST00000401788 1633 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 SMG1P4-204ENST00000523028 4131 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 RPL6P29-201ENST00000414863 865 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 AC073335.1-201ENST00000427776 363 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 AC044797.1-201ENST00000445744 679 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 RPL5P16-201ENST00000471467 790 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 AL121890.2-201ENST00000617644 465 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 MIR492-201ENST00000638676 116 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 AC104118.1-201ENST00000607625 1589 ntBASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.76□□□□□ -1.49
NPC1L1Q9UHC9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPC1L1Q9UHC9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NPC1L1Q9UHC9 ASNSP1-204ENST00000641977 1664 ntBASIC5.75□□□□□ -1.49
NPC1L1Q9UHC9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPC1L1Q9UHC9 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPC1L1Q9UHC9 CASC19-255ENST00000641733 1385 ntBASIC5.75□□□□□ -1.49
NPC1L1Q9UHC9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms