Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 MTCO1P18-201ENST00000455518 1419 ntBASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NCKIPSDQ9NZQ3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RNU1-146P-201ENST00000364015 165 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL359643.1-201ENST00000404109 423 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL390316.1-201ENST00000406279 553 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 MIR1182-201ENST00000408363 97 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RPS7P2-201ENST00000435134 607 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC092447.2-201ENST00000435487 669 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RPL35AP21-201ENST00000437667 333 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RPS29P10-201ENST00000439197 166 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 MED6P1-201ENST00000439659 713 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL035551.1-201ENST00000446931 348 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RPS3AP41-201ENST00000462701 778 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 PRELID3BP5-201ENST00000508612 460 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC112673.1-201ENST00000513168 575 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC105031.1-201ENST00000518550 476 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL049830.4-201ENST00000555149 351 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 MIR4480-201ENST00000582492 71 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 MIR548Y-201ENST00000582739 110 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RPP40P2-201ENST00000603596 712 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL160237.3-201ENST00000604114 1013 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL157392.4-201ENST00000609756 345 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RNU6-1192P-201ENST00000612197 107 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC009464.1-201ENST00000615731 469 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL122125.1-201ENST00000616999 600 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 RNU6-489P-201ENST00000618289 107 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC112694.2-201ENST00000623697 768 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 AL022393.1-201ENST00000625142 1677 ntBASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.11□□□□□ -1.59
NCKIPSDQ9NZQ3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 RNU6-207P-201ENST00000384137 107 ntBASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 AL035079.1-201ENST00000405210 287 ntBASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.1□□□□□ -1.59
NCKIPSDQ9NZQ3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms