Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RNU7-27P-201ENST00000459281 62 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC104763.1-201ENST00000475274 360 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC005912.1-201ENST00000495392 255 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AP001880.2-201ENST00000538233 448 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC069240.1-201ENST00000548774 375 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 BNIP3P32-201ENST00000600015 554 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AL160290.3-201ENST00000604869 165 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC104307.1-201ENST00000616142 196 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 uc_338.9-201ENST00000617424 182 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AC091905.4-201ENST00000623432 202 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AP000756.2-201ENST00000624168 2567 ntBASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DDX47Q9H0S4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RNA5SP123-201ENST00000363244 119 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RNU6-178P-201ENST00000384631 104 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AL078604.1-201ENST00000404609 466 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RN7SKP267-201ENST00000410381 285 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RNA5SP498-201ENST00000411342 120 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC062016.2-201ENST00000420950 676 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RAD23BP1-201ENST00000421404 1227 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC073335.1-201ENST00000427776 363 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 MTND4LP14-201ENST00000429447 288 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC079804.1-201ENST00000461922 436 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC005532.2-201ENST00000467154 373 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC092905.1-201ENST00000467527 949 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC015795.1-201ENST00000513669 327 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 RNU6-1004P-201ENST00000516584 111 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC087763.1-201ENST00000603391 286 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC012467.1-201ENST00000607740 256 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC016769.4-201ENST00000616893 535 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 CCT8P1-201ENST00000413611 1657 ntBASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX47Q9H0S4 AC090017.1-201ENST00000548612 1779 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 RPL6P29-201ENST00000414863 865 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 UBTFL3-201ENST00000418934 1024 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 AC007559.1-201ENST00000428736 355 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 RBMY2QP-201ENST00000429799 1147 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 RPEP2-201ENST00000432149 701 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 NRBF2P3-201ENST00000432731 865 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 HLA-N-201ENST00000437516 135 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 HMGB3P9-201ENST00000441799 583 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 HMGB1P5-202ENST00000451497 985 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 AC006967.1-201ENST00000467608 589 ntBASIC4.68□□□□□ -1.66
DDX47Q9H0S4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.68□□□□□ -1.66
DDX47Q9H0S4 UBTFL6-201ENST00000477929 1024 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms