Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 SLC25A18P1-201ENST00000449385 454 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 TCEA1P1-201ENST00000449716 880 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 RPL21P103-201ENST00000479921 488 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC093270.2-201ENST00000486157 792 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC073073.1-201ENST00000493920 463 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC010374.1-201ENST00000503762 1237 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 RNU2-30P-201ENST00000516209 141 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 IGKV1-32-201ENST00000519290 311 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 BRD9P1-201ENST00000529855 560 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 MIR3934-201ENST00000579806 107 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 EIF1P6-201ENST00000600054 334 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC079880.2-201ENST00000603790 1213 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AL049794.2-201ENST00000616301 365 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC024595.1-201ENST00000623088 387 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC004943.3-201ENST00000624116 600 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 SDAD1P1-202ENST00000524156 2051 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC002525.1-201ENST00000624392 1622 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC017079.1-201ENST00000333650 415 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 RN7SKP104-201ENST00000362605 328 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 EIF2S2P3-201ENST00000428356 999 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC007559.1-201ENST00000428736 355 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 ETF1P3-201ENST00000430422 1160 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 TXNP5-201ENST00000441043 315 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AL500527.1-201ENST00000448532 255 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC104689.1-201ENST00000473356 768 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 ENPP7P11-201ENST00000505915 627 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 RN7SKP283-201ENST00000517197 270 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AP003117.1-201ENST00000602771 554 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AC099669.2-201ENST00000616549 437 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AL035461.2-201ENST00000619201 524 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AL049536.1-201ENST00000625043 744 ntBASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4AQ9BY43 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 SNORA51.8-201ENST00000384234 132 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 BX323845.1-201ENST00000432417 179 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 RPL7P11-201ENST00000437586 658 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AL450023.3-201ENST00000440592 271 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 BTBD7P2-201ENST00000441962 620 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 RPL7P61-201ENST00000451721 751 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AL035404.1-201ENST00000497982 568 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 MTATP6P22-201ENST00000507369 598 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AC100784.1-201ENST00000522790 310 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AC012339.2-201ENST00000523996 453 ntBASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.4□□□□□ -1.38
CHMP4AQ9BY43 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms