Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL022578.1-201ENST00000439330 1433 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC097504.1-201ENST00000515103 2415 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC130650.2-201ENST00000618736 2403 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL136984.1-201ENST00000607611 1893 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL731556.1-201ENST00000394628 3711 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC010624.4-201ENST00000597606 1351 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 HSPA8P18-201ENST00000439846 1928 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 GCNT1P4-201ENST00000404096 329 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 ELOCP17-201ENST00000414751 326 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 OFD1P18Y-201ENST00000420889 959 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 OR10T1P-201ENST00000424327 947 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 C8orf59P1-201ENST00000429930 303 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL512593.1-201ENST00000444758 779 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 GEMIN8P3-201ENST00000445417 720 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 USP9YP12-201ENST00000450481 570 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 OR6K1P-201ENST00000456766 971 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 snoU109.1-201ENST00000459339 135 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 RPS20P21-201ENST00000466859 343 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AP003080.1-202ENST00000526526 915 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL139174.1-201ENST00000531489 886 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AP005119.2-201ENST00000579735 1105 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AP001180.3-201ENST00000582221 145 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC009779.8-201ENST00000641684 4384 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AF287957.1-201ENST00000607368 1595 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AL353796.1-201ENST00000561542 3241 ntBASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRAIPQ9BWF2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 RNU1-130P-201ENST00000363930 160 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 RNU6-952P-201ENST00000391164 108 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms