Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP4Q99569 HMGB1P46-201ENST00000520062 610 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 AP001636.2-201ENST00000525517 696 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP4Q99569 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP4Q99569 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP4Q99569 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP4Q99569 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP4Q99569 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP4Q99569 AC011840.5-201ENST00000582125 771 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 MTCO2P2-201ENST00000591258 225 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 AC087763.1-201ENST00000603391 286 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP4Q99569 EIF3FP1-201ENST00000613970 806 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 MIR1264-201ENST00000616374 69 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP4Q99569 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP4Q99569 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP4Q99569 CU459211.1-201ENST00000635667 749 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 AC073869.10-201ENST00000642016 354 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP4Q99569 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP4Q99569 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP4Q99569 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP4Q99569 MAPK10-304ENST00000641341 3984 ntBASIC4.83□□□□□ -1.64
PKP4Q99569 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP4Q99569 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP4Q99569 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP4Q99569 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP4Q99569 AL731532.2-201ENST00000623542 1953 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP4Q99569 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP4Q99569 AC017079.1-201ENST00000333650 415 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP4Q99569 RNU6-146P-201ENST00000384602 108 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 MIR92A2-201ENST00000385299 75 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PKP4Q99569 Z97832.1-201ENST00000402490 328 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 RNU4-74P-201ENST00000411280 161 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC073136.2-201ENST00000417282 849 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 MTND2P16-201ENST00000419987 799 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP4Q99569 AC092634.2-201ENST00000428146 1010 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 BRWD1P3-201ENST00000428816 390 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 MTCO1P52-201ENST00000433928 531 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKP4Q99569 RPS20P1-201ENST00000434853 354 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 SETP8-201ENST00000435341 628 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 ELOCP11-201ENST00000436690 332 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 ELOCP16-201ENST00000444494 332 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP4Q99569 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.82□□□□□ -1.64
PKP4Q99569 RPL7AP6-201ENST00000477943 801 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 RN7SL205P-201ENST00000490174 284 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP4Q99569 AC008638.1-201ENST00000506035 866 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 MRPS33P2-201ENST00000507850 322 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP4Q99569 RN7SKP287-201ENST00000516546 266 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AF186190.1-201ENST00000517470 480 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.82□□□□□ -1.64
PKP4Q99569 MORF4L1P3-201ENST00000525966 950 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP4Q99569 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 LSM3P2-201ENST00000551246 273 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 GLRXP2-201ENST00000555594 321 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 MIR4509-3-201ENST00000578671 94 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC005412.1-201ENST00000580812 1049 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 MIR4509-2-201ENST00000583920 94 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 AC013244.1-201ENST00000604279 193 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC093424.1-201ENST00000604999 338 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 AL049794.2-201ENST00000616301 365 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 MIR4509-1-201ENST00000618224 94 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 MIR6719-201ENST00000622428 87 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC018445.2-201ENST00000622987 260 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP4Q99569 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 THAP12P5-201ENST00000405864 2275 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP4Q99569 AC083843.3-201ENST00000623679 2186 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 LINC01109-201ENST00000603837 3081 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 HSPD1P14-201ENST00000432666 1618 ntBASIC4.82□□□□□ -1.64
PKP4Q99569 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP4Q99569 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms