Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNORA7B-201ENST00000384360 139 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 SNORD3H-201ENST00000384486 214 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 SNORA7A-201ENST00000384765 139 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 RNU6-903P-201ENST00000391270 109 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 HMGB3P7-201ENST00000400214 611 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 PRELID1P2-201ENST00000407805 396 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 SNORA2C-201ENST00000408564 137 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 NMD3P2-201ENST00000421815 761 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 RPL37P1-201ENST00000432310 284 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC003989.1-201ENST00000434569 565 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 RPL7L1P8-201ENST00000469911 741 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC055855.1-201ENST00000489563 579 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC021146.1-201ENST00000511202 716 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 MIR4732-201ENST00000581873 76 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC069061.3-201ENST00000582254 823 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AL034408.1-201ENST00000637712 664 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 Y_RNA.47-201ENST00000362697 108 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 Y_RNA.148-201ENST00000363557 117 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 SNORD113-7-201ENST00000363762 77 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 RNU6-1188P-201ENST00000363795 107 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 RNU1-55P-201ENST00000365510 158 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 RNU1-11P-201ENST00000383975 164 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 RNU6-441P-201ENST00000384545 106 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL139805.1-201ENST00000407837 289 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 RNA5SP155-201ENST00000411154 129 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC009413.1-201ENST00000414823 399 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC128677.1-201ENST00000436016 442 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 FABP5P14-201ENST00000437273 393 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC234771.2-201ENST00000445718 597 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 CYCSP44-201ENST00000448560 313 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL035090.1-201ENST00000454835 332 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 RNU6-1208P-201ENST00000459588 107 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL049714.1-201ENST00000466686 347 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 ALDH7A1P3-201ENST00000492517 345 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 RN7SKP24-201ENST00000515888 284 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 RNU6-764P-201ENST00000516396 105 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC112191.2-201ENST00000522428 333 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 DPPA3P2-201ENST00000553589 478 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 RN7SL835P-201ENST00000579920 262 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC115085.1-201ENST00000588924 229 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL513327.3-201ENST00000602618 469 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL670379.11-201ENST00000604059 253 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC012368.3-201ENST00000604190 219 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL670379.10-201ENST00000604330 253 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL670379.12-201ENST00000605291 253 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AL670379.9-201ENST00000605428 253 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC000068.3-201ENST00000607934 427 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC7.42□□□□□ -1.22
PHOX2BQ99453 AC079776.5-201ENST00000641920 211 ntBASIC7.42□□□□□ -1.22
PHOX2BQ99453 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms