Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.95□□□□□ -1.3
IFT140Q96RY7 MIR5684-201ENST00000585074 65 ntBASIC6.95□□□□□ -1.3
IFT140Q96RY7 AC005972.3-201ENST00000606304 481 ntBASIC6.95□□□□□ -1.3
IFT140Q96RY7 MIR7975-201ENST00000619350 68 ntBASIC6.95□□□□□ -1.3
IFT140Q96RY7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
IFT140Q96RY7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.95□□□□□ -1.3
IFT140Q96RY7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
IFT140Q96RY7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
IFT140Q96RY7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
IFT140Q96RY7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
IFT140Q96RY7 AL133244.1-201ENST00000456007 258 ntBASIC6.94□□□□□ -1.3
IFT140Q96RY7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 AC097486.1-201ENST00000515331 210 ntBASIC6.94□□□□□ -1.3
IFT140Q96RY7 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 CYCSP30-201ENST00000546447 172 ntBASIC6.94□□□□□ -1.3
IFT140Q96RY7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
IFT140Q96RY7 AC016957.2-201ENST00000616998 848 ntBASIC6.94□□□□□ -1.3
IFT140Q96RY7 AC068870.3-201ENST00000625077 2536 ntBASIC6.94□□□□□ -1.3
IFT140Q96RY7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
IFT140Q96RY7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
IFT140Q96RY7 AC079809.1-201ENST00000415468 276 ntBASIC6.93□□□□□ -1.3
IFT140Q96RY7 AL159987.2-201ENST00000432754 307 ntBASIC6.93□□□□□ -1.3
IFT140Q96RY7 AC069304.1-201ENST00000491593 704 ntBASIC6.93□□□□□ -1.3
IFT140Q96RY7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.93□□□□□ -1.3
IFT140Q96RY7 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
IFT140Q96RY7 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.93□□□□□ -1.3
IFT140Q96RY7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.93□□□□□ -1.3
IFT140Q96RY7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.93□□□□□ -1.3
IFT140Q96RY7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.93□□□□□ -1.3
IFT140Q96RY7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
IFT140Q96RY7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
IFT140Q96RY7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 RNU1-83P-201ENST00000363426 164 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 NMNAT1P2-201ENST00000435192 860 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 PPIAP3-201ENST00000450588 505 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 U3.45-201ENST00000607547 219 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 RNA5SP439-201ENST00000617595 124 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
IFT140Q96RY7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
IFT140Q96RY7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
IFT140Q96RY7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
IFT140Q96RY7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
IFT140Q96RY7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
IFT140Q96RY7 MIR30B-201ENST00000384850 88 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 OR5BE1P-201ENST00000425977 939 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 RPL7P22-201ENST00000466005 733 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 AC093853.1-201ENST00000515689 483 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.92□□□□□ -1.3
IFT140Q96RY7 AL049634.3-201ENST00000604968 457 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 OR5BE1P-202ENST00000641168 1176 ntBASIC6.92□□□□□ -1.3
IFT140Q96RY7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 AP001029.2-203ENST00000589795 4910 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 MAPK10-286ENST00000641208 8747 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 MIR921-201ENST00000401133 56 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 RPL7P1-201ENST00000468161 747 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 AC128716.1-201ENST00000475129 166 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 RPS29P19-201ENST00000479709 171 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 RN7SL323P-201ENST00000494712 295 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 HMGN1P15-201ENST00000513870 295 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
IFT140Q96RY7 MIR3651-201ENST00000630427 90 ntBASIC6.91□□□□□ -1.3
IFT140Q96RY7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
IFT140Q96RY7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
IFT140Q96RY7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.9□□□□□ -1.3
IFT140Q96RY7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
IFT140Q96RY7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.9□□□□□ -1.3
IFT140Q96RY7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms