Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC022360.1-201ENST00000521058 340 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 GLYATL1P2-202ENST00000588046 902 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AP001029.3-201ENST00000588063 596 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC124916.2-201ENST00000604416 224 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AL022099.1-201ENST00000604551 712 ntBASIC7.65□□□□□ -1.18
LRCH3Q96II8 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LRCH3Q96II8 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
LRCH3Q96II8 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
LRCH3Q96II8 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
LRCH3Q96II8 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
LRCH3Q96II8 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
LRCH3Q96II8 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC130360.2-201ENST00000533477 1556 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 ZNF652P1-201ENST00000442420 1309 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 RNU6-266P-201ENST00000364225 107 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 RNU4-66P-201ENST00000365199 138 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 LCN1P2-201ENST00000372030 223 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 RNU6-38P-201ENST00000384085 107 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 Y_RNA.463-201ENST00000384271 102 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 SNORA17A-201ENST00000391185 133 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL096800.1-201ENST00000405326 893 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 RPL12P23-201ENST00000405880 490 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 MIR1303-201ENST00000408625 86 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 Y_RNA.646-201ENST00000410980 101 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL606753.1-201ENST00000427435 87 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC018804.1-201ENST00000430381 618 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC108479.1-201ENST00000431142 427 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AF228730.2-201ENST00000438784 848 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 OR13K1P-201ENST00000444577 975 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC002553.2-201ENST00000453217 340 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 RNU6-333P-201ENST00000459117 107 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 RN7SL552P-201ENST00000462094 276 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 UBFD1P1-201ENST00000473259 814 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC092451.1-201ENST00000480211 153 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC111193.1-201ENST00000504097 155 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC097473.1-201ENST00000508142 408 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC004062.1-201ENST00000509926 645 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 RNU6-1213P-201ENST00000517075 94 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AP006245.2-201ENST00000522004 300 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 MIR3118-1-201ENST00000581787 76 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC098848.2-201ENST00000588023 330 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC245052.7-201ENST00000601161 359 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL670379.11-201ENST00000604059 253 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL670379.10-201ENST00000604330 253 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL670379.12-201ENST00000605291 253 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL670379.9-201ENST00000605428 253 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC018690.1-201ENST00000608144 626 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 SNORA17.5-201ENST00000630429 132 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
LRCH3Q96II8 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LRCH3Q96II8 AL023806.3-201ENST00000638502 2704 ntBASIC7.64□□□□□ -1.19
LRCH3Q96II8 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AL359854.1-201ENST00000614203 1594 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms