Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNORA11F-201ENST00000408237 128 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RNU4-25P-201ENST00000410569 230 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 SNRPFP1-201ENST00000414761 252 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RPS29P17-201ENST00000430795 166 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RPL23AP25-201ENST00000430973 463 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 UBE2V1P3-201ENST00000439651 417 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 CBX1P1-201ENST00000440184 427 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 FHP1-201ENST00000442741 703 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 VN1R32P-201ENST00000452234 905 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 DDX39BP2-208ENST00000453923 258 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC092905.1-201ENST00000467527 949 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 SEPT7P6-201ENST00000469999 1143 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC105918.1-201ENST00000474399 838 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC108022.1-201ENST00000493466 478 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RNA5SP464-201ENST00000516251 108 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC109635.6-201ENST00000525487 1113 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 HIGD1AP5-201ENST00000529959 259 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 CYCSP28-201ENST00000534284 321 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RPL23AP97-201ENST00000568955 471 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 FAM106CP-201ENST00000582212 507 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 SNORD91B-202ENST00000608459 222 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 uc_338.13-201ENST00000618243 179 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AL121890.3-201ENST00000618494 516 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AL672167.1-203ENST00000641299 2975 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 EIF2AP4-201ENST00000424793 1781 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC090017.1-201ENST00000548612 1779 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 OR4K17-201ENST00000315543 1032 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 SNORD96B-201ENST00000386148 79 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AL035551.1-201ENST00000446931 348 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 APOOP2-201ENST00000461561 539 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 UBA52P3-201ENST00000491303 382 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AL133372.1-201ENST00000493565 745 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC090151.1-201ENST00000520784 730 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC027455.1-201ENST00000574104 594 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC113403.1-201ENST00000604910 193 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 MIR378J-201ENST00000611988 109 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
ECHDC3Q96DC8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 MIR331-201ENST00000362302 94 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 RPS24P12-201ENST00000402084 394 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 CHIAP3-201ENST00000423668 1133 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC011998.1-201ENST00000433403 117 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 CASP3P1-201ENST00000446037 609 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 PHBP16-201ENST00000446318 950 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 RN7SL812P-201ENST00000493791 279 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC005332.5-201ENST00000591222 2919 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 OR7M1P-201ENST00000608946 533 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 NF1P10-201ENST00000613227 742 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC007546.2-201ENST00000623996 360 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 AC091046.3-201ENST00000631455 1574 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 BMS1P21-201ENST00000634565 365 ntBASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.42□□□□□ -1.7
ECHDC3Q96DC8 CCT8P1-201ENST00000413611 1657 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms