Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AP001269.3-201ENST00000588718 329 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC245036.5-201ENST00000596330 847 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 GAS5-AS1-201ENST00000602767 694 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC091488.1-201ENST00000604239 660 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC096553.1-201ENST00000605169 829 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC007349.4-201ENST00000608114 532 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AP004247.3-201ENST00000608682 624 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AP000894.4-201ENST00000610185 483 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC109309.2-201ENST00000612597 332 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC234782.5-201ENST00000617723 324 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC015804.1-201ENST00000622935 435 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 CU639417.4-201ENST00000623928 207 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AC097655.1-201ENST00000635075 318 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AL731566.1-201ENST00000620490 1937 ntBASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.72□□□□□ -1.65
RAB40AQ8WXH6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RAB40AQ8WXH6 AC093591.2-201ENST00000565254 3843 ntBASIC4.71□□□□□ -1.65
RAB40AQ8WXH6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RAB40AQ8WXH6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AF228730.1-201ENST00000397972 663 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 GAPDHP42-201ENST00000406848 981 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 RPS24P7-201ENST00000416921 246 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 PAICSP7-201ENST00000419829 962 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 RPS26P47-201ENST00000427219 348 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 HMGB1P16-201ENST00000447155 540 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC007327.1-201ENST00000447461 264 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC105233.1-201ENST00000498840 781 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC092593.2-201ENST00000513866 913 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 RNA5SP228-201ENST00000516232 133 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 OR4U1P-201ENST00000554958 912 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC090695.1-201ENST00000561269 1222 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC009097.3-201ENST00000563557 1018 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC021755.4-201ENST00000616620 456 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AL157770.1-201ENST00000623049 439 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 SRRM1P3-201ENST00000426911 2678 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AL118496.1-201ENST00000440201 1812 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC000374.1-201ENST00000434698 1745 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 AC114786.1-201ENST00000512892 1415 ntBASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40AQ8WXH6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms