Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL359265.1-201ENST00000440296 795 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 ARL2BPP10-201ENST00000446487 531 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 AC108475.1-201ENST00000507880 950 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 OR7E10P-201ENST00000526420 991 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 AL354984.3-201ENST00000604803 325 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 AC023043.4-201ENST00000612081 449 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 AC244100.1-202ENST00000621554 382 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 RNU1-83P-201ENST00000363426 164 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 ARAFP1-201ENST00000422172 605 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 PPIAP13-201ENST00000434706 478 ntBASIC1.35□□□□□ -2.19
SYNE1Q8NF91 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 PACRG-211ENST00000621363 360 ntTSL 5 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.35□□□□□ -2.19
SYNE1Q8NF91 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AP000580.1-201ENST00000404439 358 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 CRYBB2P1-203ENST00000415709 538 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC104763.1-201ENST00000475274 360 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AP002812.1-201ENST00000495378 474 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 RN7SKP182-201ENST00000410772 298 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC017078.1-201ENST00000416146 368 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 BOLA3P4-201ENST00000418151 400 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AL451139.1-201ENST00000434718 346 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 ISCUP1-201ENST00000454451 448 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AP000827.1-201ENST00000527814 258 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 RN7SL339P-201ENST00000580597 296 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 RN7SKP235-201ENST00000410662 305 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 COX6CP15-201ENST00000426313 211 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 TPT1P3-201ENST00000492841 512 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 PRELID3BP6-201ENST00000503839 571 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 RNA5SP230-201ENST00000517039 122 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 RN7SL600P-201ENST00000581811 299 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 KPNA2P3-201ENST00000584190 848 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AL021997.2-201ENST00000615674 271 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 UQCRC2P1-201ENST00000417777 1332 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AL355488.2-201ENST00000609909 2850 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AL450992.3-201ENST00000413192 568 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 PCNPP4-201ENST00000414817 517 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 RPS27AP13-201ENST00000498403 237 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AP005205.1-201ENST00000563503 508 ntBASIC1.34□□□□□ -2.19
SYNE1Q8NF91 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC1.34□□□□□ -2.19
SYNE1Q8NF91 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 SNORA62.3-201ENST00000365110 153 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 MIR491-201ENST00000384877 84 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC1.34□□□□□ -2.2
SYNE1Q8NF91 AC093578.1-201ENST00000415219 368 ntBASIC1.34□□□□□ -2.2
SYNE1Q8NF91 SLC4A1APP1-201ENST00000419995 602 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms