Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RN7SL591P-201ENST00000496150 292 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC105233.1-201ENST00000498840 781 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 BTF3P13-201ENST00000513224 490 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 IGKV2D-10-201ENST00000520194 281 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC018442.3-201ENST00000523025 183 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC021006.3-201ENST00000530771 192 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC006349.1-201ENST00000555526 235 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC040958.1-201ENST00000561102 201 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC074140.1-201ENST00000621617 208 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AL078595.3-201ENST00000623815 1166 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC139713.2-210ENST00000641741 992 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC004817.4-201ENST00000602396 3625 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AC104260.2-201ENST00000623551 3497 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 AL606537.1-201ENST00000607258 2011 ntBASIC4.67□□□□□ -1.66
BEST3Q8N1M1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BEST3Q8N1M1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RN7SKP149-201ENST00000363008 344 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 SNORA62.2-201ENST00000364672 152 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 SNORA2.3-201ENST00000383920 135 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AL390316.1-201ENST00000406279 553 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 MTND2P2-201ENST00000434633 945 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 OR7E125P-201ENST00000443450 846 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC112498.1-201ENST00000444401 332 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 IGHV5-78-201ENST00000450948 295 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RPL7P32-201ENST00000457119 744 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RPL6P9-201ENST00000466502 859 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RN7SL319P-201ENST00000480656 221 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC093890.1-201ENST00000502554 540 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC002456.2-201ENST00000509356 380 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 HPRT1P1-201ENST00000509498 657 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RNU6-1028P-201ENST00000517164 93 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 OR8G5-201ENST00000524943 1041 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 MTCYBP23-201ENST00000558717 1102 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC095057.3-201ENST00000567102 1157 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC022884.3-201ENST00000579571 248 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC125494.3-201ENST00000602759 455 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AL031320.1-201ENST00000604177 357 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms