Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ELOCP28-201ENST00000590044 317 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AL138721.1-201ENST00000616756 179 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC65Q8IXS2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.9□□□□□ -1.62
CCDC65Q8IXS2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.9□□□□□ -1.62
CCDC65Q8IXS2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.9□□□□□ -1.62
CCDC65Q8IXS2 AC012618.3-205ENST00000637896 1496 ntBASIC4.9□□□□□ -1.62
CCDC65Q8IXS2 AC011155.1-201ENST00000316512 456 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 RNA5SP505-201ENST00000364748 108 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 MIR3065-201ENST00000390137 79 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AC114495.1-201ENST00000441274 436 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AL133244.1-201ENST00000456007 258 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 MTCYBP14-201ENST00000457471 715 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 RPL21P126-201ENST00000470049 478 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 RN7SL812P-201ENST00000493791 279 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 STMN1P2-201ENST00000508435 439 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 MTCO3P42-201ENST00000509488 518 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 MTCO3P39-201ENST00000514812 518 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 RN7SKP92-201ENST00000517266 244 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 MYL12AP1-201ENST00000518490 515 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AC100770.1-201ENST00000532310 322 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AC004948.1-201ENST00000609858 672 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AC067852.7-201ENST00000623270 535 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 AL356121.2-201ENST00000624715 780 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 MIR6715B-201ENST00000637172 77 ntBASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC65Q8IXS2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 VPS35P1-201ENST00000563400 1518 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 MIR129-1-201ENST00000384972 72 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 RPEP3-201ENST00000425462 676 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AP000936.3-201ENST00000438127 255 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AL138878.2-201ENST00000440581 1241 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC111000.3-201ENST00000508057 576 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC093765.1-201ENST00000603758 881 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 SNORA35B-201ENST00000607417 129 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC091979.2-201ENST00000607514 214 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC116651.1-201ENST00000609724 556 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC012409.3-201ENST00000611343 981 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 MIR7703-201ENST00000620784 77 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AC002044.3-201ENST00000623314 541 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 AL132640.2-201ENST00000559968 1698 ntBASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC65Q8IXS2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms