Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 RN7SKP288-201ENST00000516227 268 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AC112191.2-201ENST00000522428 333 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AP000648.1-201ENST00000529682 397 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 OR8G3P-201ENST00000533406 921 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 BPTFP1-201ENST00000579209 492 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL390838.2-201ENST00000602394 274 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL360012.1-201ENST00000602813 131 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL606834.2-201ENST00000602954 668 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AC007684.1-201ENST00000609671 477 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AC099654.12-201ENST00000639868 649 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 PABPC1P9-201ENST00000426076 1612 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC015689.2-201ENST00000528172 1738 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AL359955.1-201ENST00000455242 3275 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 MIR375-201ENST00000362103 64 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 Y_RNA.302-201ENST00000364997 102 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RN7SKP269-201ENST00000365545 319 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RNY3P14-201ENST00000384309 102 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 MIR320B1-201ENST00000390209 79 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC092642.1-201ENST00000392417 425 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RPL23AP47-201ENST00000408017 460 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RNA5SP178-201ENST00000410380 128 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 DPPA2P1-201ENST00000428060 556 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 MTND6P12-201ENST00000428247 522 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RPL12P16-201ENST00000431098 498 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 DNAJC19P1-201ENST00000455312 319 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 ARPC3P2-201ENST00000457786 533 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RNU1-88P-201ENST00000459274 128 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RPL30P9-201ENST00000465586 330 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 PSMB7P1-201ENST00000556349 514 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC027243.2-201ENST00000602530 724 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC145423.1-201ENST00000605712 336 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AL357080.1-201ENST00000617394 239 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC127024.6-201ENST00000621598 424 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC095031.1-201ENST00000623685 672 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC019226.1-201ENST00000625666 515 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms