Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 NOP56P2-201ENST00000447491 769 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 TCEA1P1-201ENST00000449716 880 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC091153.1-201ENST00000466297 402 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 RPL12P20-201ENST00000475538 479 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 RPL7P41-201ENST00000485823 957 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 IGBP1P4-201ENST00000503202 879 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC104108.1-201ENST00000509930 412 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 RN7SKP122-201ENST00000515923 296 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 ATP5F1P7-201ENST00000567330 760 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 MIR4277-201ENST00000578298 84 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 MIR4715-201ENST00000584117 79 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC011492.1-201ENST00000600023 315 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC125494.3-201ENST00000602759 455 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AP002906.1-201ENST00000603405 233 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC026790.2-201ENST00000606282 430 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AL512427.1-201ENST00000618593 349 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AL137100.1-201ENST00000556703 1620 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 KARSP3-201ENST00000571212 1504 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 MIR589-201ENST00000385238 99 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC048351.1-201ENST00000420064 602 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 FO393414.1-201ENST00000428697 1184 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC092170.1-201ENST00000440211 356 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AURKAPS2-201ENST00000454983 333 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 GTF2IP12-201ENST00000456547 356 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 RPL7AP52-201ENST00000458096 790 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC020898.1-201ENST00000474167 787 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC097173.1-201ENST00000505862 819 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC017076.1-201ENST00000607613 578 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 FRG1HP-204ENST00000617940 757 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 MTND4P31-201ENST00000425607 1343 ntBASIC5.43□□□□□ -1.54
HERC6Q8IVU3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HERC6Q8IVU3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 ZNF849P-201ENST00000594711 1566 ntBASIC5.42□□□□□ -1.54
HERC6Q8IVU3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 Y_RNA.126-201ENST00000363382 111 ntBASIC5.42□□□□□ -1.54
HERC6Q8IVU3 RN7SKP227-201ENST00000364445 330 ntBASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AC096533.1-201ENST00000411645 353 ntBASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AC002524.1-201ENST00000411687 547 ntBASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 BX510359.2-201ENST00000417920 305 ntBASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.42□□□□□ -1.54
HERC6Q8IVU3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms