Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6-794P-201ENST00000517261 64 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 OR6M2P-201ENST00000529831 871 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 DNAJC8P1-201ENST00000554535 372 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 TPRX1P1-201ENST00000557620 319 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC023968.1-201ENST00000560719 475 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC009120.3-201ENST00000563335 499 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC009977.1-201ENST00000586015 570 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC018638.8-201ENST00000588755 281 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC063977.7-201ENST00000594454 337 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC011453.2-201ENST00000603737 729 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AP004607.9-201ENST00000618202 316 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AL078596.1-201ENST00000624856 447 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC119674.1-207ENST00000641355 633 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC010928.1-201ENST00000592477 1447 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AP002907.1-201ENST00000606361 1430 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC117409.1-201ENST00000470499 1310 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RNU6-543P-201ENST00000362576 108 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 Y_RNA.133-201ENST00000363428 110 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 Y_RNA.166-201ENST00000363730 102 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RNU6-474P-201ENST00000384243 107 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AL049693.1-201ENST00000402760 611 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 SNORA11.5-201ENST00000408163 128 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RNU6-908P-201ENST00000410160 94 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RN7SKP129-201ENST00000410288 299 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RNU2-18P-201ENST00000411224 162 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 OR1AA1P-201ENST00000419597 916 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 GTF2IP20-201ENST00000431663 360 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 CYCSP11-201ENST00000436426 315 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RABEPKP1-201ENST00000440529 1026 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AL513533.1-201ENST00000453728 415 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RPL7P48-201ENST00000461513 746 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 PSAT1P4-201ENST00000466500 526 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RN7SL568P-201ENST00000493069 298 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RPL7L1P13-201ENST00000511702 739 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RNU6-123P-201ENST00000516163 102 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RNA5SP473-201ENST00000516402 125 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 Vault.2-201ENST00000516519 98 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 ZNF705CP-201ENST00000530515 889 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC019322.1-201ENST00000571869 389 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms