Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RPS6P23-201ENST00000413224 722 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 UBE2V1P14-201ENST00000415815 558 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 HMGB3P20-201ENST00000417997 600 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 RPS7P14-201ENST00000426405 583 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AL358934.1-201ENST00000432346 324 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC002486.1-201ENST00000435098 391 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 LINC00328-2P-201ENST00000436585 219 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 ARPC3P1-201ENST00000437218 533 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC245291.3-201ENST00000443400 292 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC097493.1-201ENST00000463958 372 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 RPL12P31-201ENST00000478433 450 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AL161747.1-201ENST00000480068 358 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 RN7SL714P-201ENST00000487050 298 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 HMGN1P13-201ENST00000505795 138 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 RNA5SP206-201ENST00000516703 121 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 TPM3P3-201ENST00000521343 354 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 MIR4307-201ENST00000582802 84 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AP001836.1-201ENST00000604675 523 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC055876.5-201ENST00000605667 259 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC018695.5-201ENST00000605872 315 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AC019193.2-201ENST00000610012 634 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 U1.34-201ENST00000618578 162 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 MIR6813-201ENST00000621638 56 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 AL355488.2-201ENST00000609909 2850 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 DOCK11P1-201ENST00000553480 5932 ntBASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
UBE3DQ7Z6J8 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC011369.2-201ENST00000624423 1567 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.142-201ENST00000363491 102 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.162-201ENST00000363683 102 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 RNU6-1227P-201ENST00000383981 107 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 RPS3AP36-201ENST00000398190 775 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL590004.1-201ENST00000405321 300 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL603766.1-201ENST00000407763 664 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MIR1305-201ENST00000408300 86 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 Z82198.3-201ENST00000421145 199 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 SNRPEP7-201ENST00000438350 220 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MTCO3P20-201ENST00000454926 688 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 RPL21P71-201ENST00000465598 459 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 RN7SL165P-201ENST00000477476 291 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 RPL7P6-201ENST00000480903 738 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC106822.1-201ENST00000502647 526 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms