Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TAF13P2-201ENST00000416876 286 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.3□□□□□ -1.56
ALFQ53S48 PTMAP6-201ENST00000439110 327 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 RNF2P1-201ENST00000442955 1010 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALFQ53S48 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALFQ53S48 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.3□□□□□ -1.56
ALFQ53S48 RPL7P32-201ENST00000457119 744 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 AC091959.2-201ENST00000477363 321 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 RPSAP50-201ENST00000481955 852 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 AC093801.2-201ENST00000503966 1050 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 AC097173.1-201ENST00000505862 819 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.3□□□□□ -1.56
ALFQ53S48 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.3□□□□□ -1.56
ALFQ53S48 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.3□□□□□ -1.56
ALFQ53S48 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ALFQ53S48 AC023825.1-201ENST00000566704 1030 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ALFQ53S48 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ALFQ53S48 MIR4660-201ENST00000583549 74 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 VN1R87P-201ENST00000596706 487 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 BNIP3P35-201ENST00000604530 490 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 AC099785.1-201ENST00000605697 437 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 OR7A19P-201ENST00000608051 733 ntBASIC5.3□□□□□ -1.56
ALFQ53S48 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.3□□□□□ -1.56
ALFQ53S48 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALFQ53S48 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.3□□□□□ -1.56
ALFQ53S48 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALFQ53S48 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
ALFQ53S48 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ALFQ53S48 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALFQ53S48 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
ALFQ53S48 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.3□□□□□ -1.56
ALFQ53S48 AC025263.3-201ENST00000622965 1396 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.29□□□□□ -1.56
ALFQ53S48 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 AC074029.4-201ENST00000624796 1859 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 SNURFL-201ENST00000309296 343 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.29□□□□□ -1.56
ALFQ53S48 RNA5SP507-201ENST00000363603 121 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 MIR105-2-201ENST00000385083 81 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.29□□□□□ -1.56
ALFQ53S48 RPL12P9-201ENST00000412942 488 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 RPL23AP27-201ENST00000415161 451 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC079809.1-201ENST00000415468 276 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.29□□□□□ -1.56
ALFQ53S48 GAPDHP58-201ENST00000438477 1006 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 RNU7-140P-201ENST00000459546 60 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.29□□□□□ -1.56
ALFQ53S48 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.29□□□□□ -1.56
ALFQ53S48 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.29□□□□□ -1.56
ALFQ53S48 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 RNA5SP230-201ENST00000517039 122 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.29□□□□□ -1.56
ALFQ53S48 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.29□□□□□ -1.56
ALFQ53S48 AC074029.1-201ENST00000552531 1044 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC027455.1-201ENST00000574104 594 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.29□□□□□ -1.56
ALFQ53S48 AC011447.4-201ENST00000587562 111 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC067852.4-201ENST00000590314 478 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 BNIP3P27-201ENST00000599991 412 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 AC005191.1-201ENST00000603950 358 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 RNU6-1192P-201ENST00000612197 107 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 BNIP3P41-202ENST00000616656 861 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 RNU6-489P-201ENST00000618289 107 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AL512427.1-201ENST00000618593 349 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 AC103798.2-201ENST00000624292 632 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 AL121594.5-201ENST00000631724 573 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.29□□□□□ -1.56
ALFQ53S48 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ALFQ53S48 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 AC022893.2-201ENST00000564832 3296 ntBASIC5.29□□□□□ -1.56
ALFQ53S48 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ALFQ53S48 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.29□□□□□ -1.56
ALFQ53S48 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ALFQ53S48 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
ALFQ53S48 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
ALFQ53S48 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.28□□□□□ -1.56
ALFQ53S48 AC016716.1-201ENST00000265882 708 ntBASIC5.28□□□□□ -1.56
ALFQ53S48 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ALFQ53S48 RNU6-549P-201ENST00000384433 107 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms