Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL121578.1-201ENST00000428051 892 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC068287.1-201ENST00000430283 295 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 RPS29P17-201ENST00000430795 166 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 Z95152.1-201ENST00000453556 656 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 RPL7P32-201ENST00000457119 744 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 RN7SL691P-201ENST00000494487 301 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 PHBP17-201ENST00000528576 541 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AL109766.1-201ENST00000555080 552 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC090515.3-201ENST00000560431 315 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AL356218.2-201ENST00000605264 187 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC025175.1-201ENST00000606482 759 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC023813.4-201ENST00000607580 580 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AL353600.1-201ENST00000608148 251 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 MIR7154-201ENST00000620673 73 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 AC008013.2-202ENST00000637965 364 ntBASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN20Q4JDL3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 RN7SKP224-201ENST00000364140 325 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 SNORA56-201ENST00000383966 129 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 RN7SKP216-201ENST00000411050 312 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC016769.2-201ENST00000414815 475 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 RAB9AP4-201ENST00000415230 609 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC096644.3-201ENST00000416788 338 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 RPA2P2-201ENST00000419698 796 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 MFSD13B-201ENST00000420133 1290 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AL157831.1-201ENST00000426134 473 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 MAPRE1P3-201ENST00000435438 796 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 RPS3AP54-201ENST00000435535 734 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 TMX2P1-201ENST00000436507 708 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 CBX1P1-201ENST00000440184 427 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 RPS6P2-201ENST00000454208 705 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC011276.1-201ENST00000469688 323 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC010374.1-201ENST00000503762 1237 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC108145.1-201ENST00000503770 153 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AC006064.5-201ENST00000541782 248 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AL008729.2-201ENST00000606393 473 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 OR7M1P-201ENST00000608946 533 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 AP003497.2-201ENST00000624220 967 ntBASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN20Q4JDL3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
PTPN20Q4JDL3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 VPS35P1-201ENST00000563400 1518 ntBASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 RNU1-32P-201ENST00000363937 159 ntBASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 RNA5SP509-201ENST00000364577 119 ntBASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 RNA5SP146-201ENST00000410743 123 ntBASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 MTND6P18-201ENST00000439477 513 ntBASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN20Q4JDL3 RPL10P17-201ENST00000453852 316 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms