Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL360081.1-201ENST00000428299 555 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.71□□□□□ -1.66
LTBQ06643 USP9YP28-201ENST00000435142 589 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 BX842559.2-201ENST00000451418 605 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC239798.3-201ENST00000454459 408 ntBASIC4.71□□□□□ -1.66
LTBQ06643 RPS3AP41-201ENST00000462701 778 ntBASIC4.71□□□□□ -1.66
LTBQ06643 RN7SL189P-201ENST00000468631 289 ntBASIC4.71□□□□□ -1.66
LTBQ06643 SYT14P1-201ENST00000481459 721 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC069304.1-201ENST00000491593 704 ntBASIC4.71□□□□□ -1.66
LTBQ06643 RPS27AP16-201ENST00000492222 470 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LTBQ06643 AC110775.1-201ENST00000513721 462 ntBASIC4.71□□□□□ -1.66
LTBQ06643 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 AC087373.1-201ENST00000524920 491 ntBASIC4.71□□□□□ -1.66
LTBQ06643 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 LSM3P2-201ENST00000551246 273 ntBASIC4.71□□□□□ -1.66
LTBQ06643 OR11J2P-201ENST00000555298 907 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC006349.1-201ENST00000555526 235 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC127381.1-201ENST00000555979 939 ntBASIC4.71□□□□□ -1.66
LTBQ06643 MTCYBP33-201ENST00000575007 1130 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.71□□□□□ -1.66
LTBQ06643 Z99497.2-201ENST00000603634 310 ntBASIC4.71□□□□□ -1.66
LTBQ06643 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 TAS2R6P-201ENST00000605022 826 ntBASIC4.71□□□□□ -1.66
LTBQ06643 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 AC013470.4-201ENST00000619978 986 ntBASIC4.71□□□□□ -1.66
LTBQ06643 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.71□□□□□ -1.66
LTBQ06643 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LTBQ06643 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
LTBQ06643 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.71□□□□□ -1.66
LTBQ06643 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.71□□□□□ -1.66
LTBQ06643 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LTBQ06643 CASC19-281ENST00000642118 1554 ntBASIC4.7□□□□□ -1.66
LTBQ06643 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LTBQ06643 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LTBQ06643 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
LTBQ06643 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LTBQ06643 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LTBQ06643 SNORD56.4-201ENST00000363883 71 ntBASIC4.7□□□□□ -1.66
LTBQ06643 RNU4-68P-201ENST00000364314 141 ntBASIC4.7□□□□□ -1.66
LTBQ06643 RNU1-74P-201ENST00000384108 171 ntBASIC4.7□□□□□ -1.66
LTBQ06643 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC211486.3-201ENST00000412694 621 ntBASIC4.7□□□□□ -1.66
LTBQ06643 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 AL121878.1-201ENST00000418638 859 ntBASIC4.7□□□□□ -1.66
LTBQ06643 PTP4A1P1-201ENST00000420539 515 ntBASIC4.7□□□□□ -1.66
LTBQ06643 EI24P4-201ENST00000423683 1078 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 RPP40P1-201ENST00000426762 456 ntBASIC4.7□□□□□ -1.66
LTBQ06643 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LTBQ06643 FAM96AP1-201ENST00000430879 482 ntBASIC4.7□□□□□ -1.66
LTBQ06643 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBQ06643 GTF2IP3-201ENST00000433887 494 ntBASIC4.7□□□□□ -1.66
LTBQ06643 RPS27P5-201ENST00000444247 244 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC012512.1-201ENST00000446594 718 ntBASIC4.7□□□□□ -1.66
LTBQ06643 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LTBQ06643 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.7□□□□□ -1.66
LTBQ06643 AC023424.1-201ENST00000496058 459 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBQ06643 SNRPCP2-201ENST00000504370 475 ntBASIC4.7□□□□□ -1.66
LTBQ06643 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.7□□□□□ -1.66
LTBQ06643 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.7□□□□□ -1.66
LTBQ06643 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBQ06643 OR4A2P-201ENST00000527276 913 ntBASIC4.7□□□□□ -1.66
LTBQ06643 TOMM20P2-201ENST00000540082 421 ntBASIC4.7□□□□□ -1.66
LTBQ06643 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LTBQ06643 AP005136.1-201ENST00000579765 429 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.7□□□□□ -1.66
LTBQ06643 RN7SL622P-201ENST00000585292 275 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBQ06643 AC068790.2-201ENST00000602601 557 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AL020997.2-201ENST00000602607 184 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AL109653.1-201ENST00000603091 248 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC005084.1-201ENST00000605160 304 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC024060.1-201ENST00000607052 494 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AL592494.3-201ENST00000609485 464 ntBASIC4.7□□□□□ -1.66
LTBQ06643 OR8G7P-201ENST00000616658 848 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC009318.3-201ENST00000616916 503 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC092140.2-201ENST00000618027 521 ntBASIC4.7□□□□□ -1.66
LTBQ06643 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBQ06643 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms