Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC074101.1-201ENST00000637861 241 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC103706.2-201ENST00000638080 240 ntBASIC4.95□□□□□ -1.62
RAE1P78406 OR8B1P-202ENST00000641132 1178 ntBASIC4.95□□□□□ -1.62
RAE1P78406 RBPJP2-201ENST00000618187 1444 ntBASIC4.95□□□□□ -1.62
RAE1P78406 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RAE1P78406 AL513185.3-201ENST00000433335 1300 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC114947.2-201ENST00000565748 2125 ntBASIC4.94□□□□□ -1.62
RAE1P78406 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.94□□□□□ -1.62
RAE1P78406 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 U3.32-201ENST00000408116 212 ntBASIC4.94□□□□□ -1.62
RAE1P78406 MIR1303-201ENST00000408625 86 ntBASIC4.94□□□□□ -1.62
RAE1P78406 RNU4-72P-201ENST00000410754 173 ntBASIC4.94□□□□□ -1.62
RAE1P78406 RNU6-575P-201ENST00000411326 105 ntBASIC4.94□□□□□ -1.62
RAE1P78406 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.94□□□□□ -1.62
RAE1P78406 RPL7P53-201ENST00000421245 739 ntBASIC4.94□□□□□ -1.62
RAE1P78406 GAPDHP49-201ENST00000421421 961 ntBASIC4.94□□□□□ -1.62
RAE1P78406 RPL21P43-201ENST00000425440 472 ntBASIC4.94□□□□□ -1.62
RAE1P78406 MTND1P32-201ENST00000433043 938 ntBASIC4.94□□□□□ -1.62
RAE1P78406 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 PCNPP2-201ENST00000441651 455 ntBASIC4.94□□□□□ -1.62
RAE1P78406 RPS11P7-201ENST00000442125 465 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.94□□□□□ -1.62
RAE1P78406 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.94□□□□□ -1.62
RAE1P78406 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.94□□□□□ -1.62
RAE1P78406 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.94□□□□□ -1.62
RAE1P78406 AC126121.1-201ENST00000482313 553 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AC104971.1-201ENST00000495117 578 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AC097173.1-201ENST00000505862 819 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.94□□□□□ -1.62
RAE1P78406 AC093755.1-201ENST00000512950 1023 ntBASIC4.94□□□□□ -1.62
RAE1P78406 RNU6-416P-201ENST00000516265 103 ntBASIC4.94□□□□□ -1.62
RAE1P78406 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AC010306.1-201ENST00000523223 1117 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AC087373.1-201ENST00000524920 491 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.94□□□□□ -1.62
RAE1P78406 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.94□□□□□ -1.62
RAE1P78406 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.94□□□□□ -1.62
RAE1P78406 NPM1P47-201ENST00000560843 856 ntBASIC4.94□□□□□ -1.62
RAE1P78406 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.94□□□□□ -1.62
RAE1P78406 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.94□□□□□ -1.62
RAE1P78406 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.94□□□□□ -1.62
RAE1P78406 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.94□□□□□ -1.62
RAE1P78406 AL392048.1-201ENST00000613946 534 ntBASIC4.94□□□□□ -1.62
RAE1P78406 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 AP000676.3-201ENST00000623299 569 ntBASIC4.94□□□□□ -1.62
RAE1P78406 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.94□□□□□ -1.62
RAE1P78406 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 SAMMSON-209ENST00000641222 1100 ntBASIC4.94□□□□□ -1.62
RAE1P78406 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.94□□□□□ -1.62
RAE1P78406 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RAE1P78406 AC235565.1-201ENST00000456962 1325 ntBASIC4.94□□□□□ -1.62
RAE1P78406 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.94□□□□□ -1.62
RAE1P78406 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
RAE1P78406 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RAE1P78406 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RAE1P78406 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RAE1P78406 U3.2-201ENST00000362981 210 ntBASIC4.93□□□□□ -1.62
RAE1P78406 OR1L1-202ENST00000373686 1083 ntBASIC4.93□□□□□ -1.62
RAE1P78406 RNU6-157P-201ENST00000383957 107 ntBASIC4.93□□□□□ -1.62
RAE1P78406 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RAE1P78406 AL390316.1-201ENST00000406279 553 ntBASIC4.93□□□□□ -1.62
RAE1P78406 RPL35AP24-201ENST00000413846 330 ntBASIC4.93□□□□□ -1.62
RAE1P78406 TRGV6-201ENST00000417928 299 ntBASIC4.93□□□□□ -1.62
RAE1P78406 HMGN2P27-201ENST00000427352 270 ntBASIC4.93□□□□□ -1.62
RAE1P78406 NPM1P22-201ENST00000427761 952 ntBASIC4.93□□□□□ -1.62
RAE1P78406 RPL7L1P9-201ENST00000431298 745 ntBASIC4.93□□□□□ -1.62
RAE1P78406 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.93□□□□□ -1.62
RAE1P78406 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.93□□□□□ -1.62
RAE1P78406 MTND4P32-201ENST00000437189 1237 ntBASIC4.93□□□□□ -1.62
RAE1P78406 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 RPS29P10-201ENST00000439197 166 ntBASIC4.93□□□□□ -1.62
RAE1P78406 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 AL133477.1-201ENST00000457472 514 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 RPS4XP20-201ENST00000505751 772 ntBASIC4.93□□□□□ -1.62
RAE1P78406 PGAM1P13-201ENST00000507497 754 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC026782.2-201ENST00000510845 636 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC108471.1-201ENST00000513977 287 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC012400.1-201ENST00000518452 381 ntBASIC4.93□□□□□ -1.62
RAE1P78406 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms