Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MIR4480-201ENST00000582492 71 ntBASIC3.94□□□□□ -1.78
LSM6P62312 AL139395.1-201ENST00000603662 160 ntBASIC3.94□□□□□ -1.78
LSM6P62312 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.94□□□□□ -1.78
LSM6P62312 AL021707.7-201ENST00000607991 416 ntBASIC3.94□□□□□ -1.78
LSM6P62312 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.94□□□□□ -1.78
LSM6P62312 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.94□□□□□ -1.78
LSM6P62312 AL133243.1-201ENST00000614487 366 ntBASIC3.94□□□□□ -1.78
LSM6P62312 MIR6780A-201ENST00000615089 68 ntBASIC3.94□□□□□ -1.78
LSM6P62312 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.94□□□□□ -1.78
LSM6P62312 AC091953.3-201ENST00000623220 236 ntBASIC3.94□□□□□ -1.78
LSM6P62312 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.94□□□□□ -1.78
LSM6P62312 AC006065.6-201ENST00000625201 545 ntBASIC3.94□□□□□ -1.78
LSM6P62312 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LSM6P62312 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LSM6P62312 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LSM6P62312 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
LSM6P62312 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
LSM6P62312 AC105074.1-201ENST00000623380 3095 ntBASIC3.94□□□□□ -1.78
LSM6P62312 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
LSM6P62312 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM6P62312 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM6P62312 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM6P62312 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LSM6P62312 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
LSM6P62312 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
LSM6P62312 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM6P62312 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LSM6P62312 OR4K15-201ENST00000305051 1216 ntBASIC3.93□□□□□ -1.78
LSM6P62312 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM6P62312 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.93□□□□□ -1.78
LSM6P62312 AC007394.1-201ENST00000421941 531 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AP001324.1-201ENST00000428553 399 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM6P62312 AC011753.3-201ENST00000443436 406 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AC104306.1-201ENST00000449702 371 ntBASIC3.93□□□□□ -1.78
LSM6P62312 NDUFS5P3-201ENST00000450668 321 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AL513533.1-201ENST00000453728 415 ntBASIC3.93□□□□□ -1.78
LSM6P62312 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM6P62312 RPL12P20-201ENST00000475538 479 ntBASIC3.93□□□□□ -1.78
LSM6P62312 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.93□□□□□ -1.78
LSM6P62312 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LSM6P62312 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 AC100770.1-201ENST00000532310 322 ntBASIC3.93□□□□□ -1.78
LSM6P62312 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM6P62312 RPL23AP97-201ENST00000568955 471 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AC069061.3-201ENST00000582254 823 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AC068790.7-201ENST00000602347 528 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AC068790.5-201ENST00000602741 355 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AC008638.3-201ENST00000603341 463 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AL356274.1-201ENST00000617064 410 ntBASIC3.93□□□□□ -1.78
LSM6P62312 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 AC007546.2-201ENST00000623996 360 ntBASIC3.93□□□□□ -1.78
LSM6P62312 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM6P62312 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.93□□□□□ -1.78
LSM6P62312 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
LSM6P62312 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LSM6P62312 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM6P62312 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LSM6P62312 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
LSM6P62312 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LSM6P62312 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.92□□□□□ -1.78
LSM6P62312 IQCB2P-201ENST00000401788 1633 ntBASIC3.92□□□□□ -1.78
LSM6P62312 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.92□□□□□ -1.78
LSM6P62312 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 AC004552.1-201ENST00000419089 348 ntBASIC3.92□□□□□ -1.78
LSM6P62312 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.92□□□□□ -1.78
LSM6P62312 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.92□□□□□ -1.78
LSM6P62312 NPM1P26-201ENST00000426339 738 ntBASIC3.92□□□□□ -1.78
LSM6P62312 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.92□□□□□ -1.78
LSM6P62312 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.92□□□□□ -1.78
LSM6P62312 CEACAMP6-201ENST00000452007 574 ntBASIC3.92□□□□□ -1.78
LSM6P62312 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.92□□□□□ -1.78
LSM6P62312 RPS26P3-201ENST00000470205 348 ntBASIC3.92□□□□□ -1.78
LSM6P62312 RPL23AP2-201ENST00000471227 466 ntBASIC3.92□□□□□ -1.78
LSM6P62312 AC090543.2-201ENST00000483963 348 ntBASIC3.92□□□□□ -1.78
LSM6P62312 AC004057.1-201ENST00000485827 348 ntBASIC3.92□□□□□ -1.78
LSM6P62312 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.92□□□□□ -1.78
LSM6P62312 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.92□□□□□ -1.78
LSM6P62312 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.92□□□□□ -1.78
LSM6P62312 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 AP001781.1-201ENST00000530977 207 ntBASIC3.92□□□□□ -1.78
LSM6P62312 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.92□□□□□ -1.78
LSM6P62312 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.92□□□□□ -1.78
LSM6P62312 AL138721.1-201ENST00000616756 179 ntBASIC3.92□□□□□ -1.78
LSM6P62312 AL669942.2-201ENST00000620352 697 ntBASIC3.92□□□□□ -1.78
LSM6P62312 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.92□□□□□ -1.78
LSM6P62312 DHX40P1-201ENST00000588725 1412 ntBASIC3.92□□□□□ -1.78
LSM6P62312 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM6P62312 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms