Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AP000346.3-201ENST00000622821 210 ntBASIC4.89□□□□□ -1.63
CLDN2P57739 AC104985.3-201ENST00000623479 597 ntBASIC4.89□□□□□ -1.63
CLDN2P57739 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN2P57739 FRG1EP-201ENST00000634469 770 ntBASIC4.89□□□□□ -1.63
CLDN2P57739 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN2P57739 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN2P57739 LINC01808-202ENST00000641680 1116 ntBASIC4.89□□□□□ -1.63
CLDN2P57739 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN2P57739 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN2P57739 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN2P57739 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CLDN2P57739 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN2P57739 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 ENSAP3-201ENST00000312710 333 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 MIR133A2-201ENST00000347538 102 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 RNU6-543P-201ENST00000362576 108 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN2P57739 LRRC37BP1-201ENST00000398851 714 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 RPS16P5-201ENST00000406501 404 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 RNU2-50P-201ENST00000410494 143 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 TBCAP2-201ENST00000416175 326 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 OR51A6P-201ENST00000418680 1004 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 OSTCP5-201ENST00000425293 453 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
CLDN2P57739 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN2P57739 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN2P57739 AC002542.1-201ENST00000440683 193 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 ARL5AP2-201ENST00000444698 533 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 AC073264.2-201ENST00000448886 166 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN2P57739 SLC25A18P1-201ENST00000449385 454 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN2P57739 AURKAPS2-201ENST00000454983 333 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 NDUFA12P1-201ENST00000455914 406 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 RN7SL860P-201ENST00000473738 223 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN2P57739 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN2P57739 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN2P57739 OR8I1P-201ENST00000529291 931 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AP002812.4-201ENST00000532139 286 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN2P57739 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN2P57739 POLR2KP1-201ENST00000553226 168 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN2P57739 AC027455.1-201ENST00000574104 594 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 PRPF19P1-201ENST00000584766 898 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 ZNF92P3-201ENST00000596594 954 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AP001160.4-201ENST00000596971 382 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AL512782.1-201ENST00000603093 364 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AL160237.3-201ENST00000604114 1013 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AL391358.1-201ENST00000605342 190 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AC112220.2-201ENST00000605513 533 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 MIR7973-1-201ENST00000614683 76 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AL109659.3-201ENST00000624985 950 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 AC006927.4-201ENST00000639187 543 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN2P57739 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN2P57739 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN2P57739 MUC2-202ENST00000613187 4845 ntBASIC4.88□□□□□ -1.63
CLDN2P57739 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
CLDN2P57739 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN2P57739 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CLDN2P57739 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN2P57739 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN2P57739 AL137100.1-201ENST00000556703 1620 ntBASIC4.87□□□□□ -1.63
CLDN2P57739 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN2P57739 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN2P57739 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN2P57739 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms