Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN6P56747 ARL4AP4-201ENST00000434170 518 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 AL031584.1-201ENST00000447169 754 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 snoU13.22-201ENST00000459428 104 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN6P56747 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.35□□□□□ -1.71
CLDN6P56747 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 AC138938.1-201ENST00000515431 782 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 RN7SKP46-201ENST00000515942 234 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN6P56747 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN6P56747 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 MIR3158-1-201ENST00000583596 81 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN6P56747 AC023813.4-201ENST00000607580 580 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN6P56747 AC022106.2-201ENST00000620114 757 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 VPS35P1-201ENST00000563400 1518 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 AC017104.4-201ENST00000636283 1592 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN6P56747 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CLDN6P56747 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLDN6P56747 MAPK10-320ENST00000641462 6696 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CLDN6P56747 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN6P56747 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN6P56747 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN6P56747 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN6P56747 MIR331-201ENST00000362302 94 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 E2F6P2-201ENST00000420708 748 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 RCC2P2-201ENST00000422174 918 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AC006946.1-201ENST00000429106 328 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN6P56747 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN6P56747 AP000936.3-201ENST00000438127 255 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN6P56747 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN6P56747 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN6P56747 RFPL4AP5-201ENST00000514977 504 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 RNA5SP143-201ENST00000516936 115 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AC022616.2-201ENST00000523185 300 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 MTCO1P49-201ENST00000523429 802 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 OR10D4P-201ENST00000525892 951 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN6P56747 AGGF1P6-201ENST00000569213 976 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AP005901.4-201ENST00000577336 569 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN6P56747 AP005262.1-201ENST00000582646 997 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.34□□□□□ -1.71
CLDN6P56747 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN6P56747 AL137072.1-201ENST00000603444 466 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN6P56747 AL589935.2-201ENST00000616471 1231 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN6P56747 TMEM30CP-203ENST00000637814 1035 ntBASIC4.34□□□□□ -1.71
CLDN6P56747 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN6P56747 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN6P56747 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN6P56747 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN6P56747 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLDN6P56747 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CLDN6P56747 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.34□□□□□ -1.72
CLDN6P56747 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CLDN6P56747 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CLDN6P56747 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CLDN6P56747 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLDN6P56747 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CLDN6P56747 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 MTCO1P22-201ENST00000604619 1360 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLDN6P56747 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 AL583835.1-201ENST00000399570 407 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 RPS27AP11-201ENST00000402798 447 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN6P56747 AL139095.3-201ENST00000419672 1203 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 AC006326.1-201ENST00000445465 787 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms