Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH6P55285 AP001160.4-201ENST00000596971 382 ntBASIC4.58□□□□□ -1.68
CDH6P55285 AC012213.4-201ENST00000606457 354 ntBASIC4.58□□□□□ -1.68
CDH6P55285 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 MFSD8-216ENST00000641147 4009 ntBASIC4.58□□□□□ -1.68
CDH6P55285 AC027290.2-201ENST00000623210 18662 ntBASIC4.58□□□□□ -1.68
CDH6P55285 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH6P55285 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH6P55285 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH6P55285 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CDH6P55285 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
CDH6P55285 RAD17P1-201ENST00000418130 2042 ntBASIC4.57□□□□□ -1.68
CDH6P55285 RNU1-130P-201ENST00000363930 160 ntBASIC4.57□□□□□ -1.68
CDH6P55285 RNU6-398P-201ENST00000384143 109 ntBASIC4.57□□□□□ -1.68
CDH6P55285 TRIM60P17-201ENST00000415181 719 ntBASIC4.57□□□□□ -1.68
CDH6P55285 RPEP3-201ENST00000425462 676 ntBASIC4.57□□□□□ -1.68
CDH6P55285 IPMKP1-201ENST00000425988 855 ntBASIC4.57□□□□□ -1.68
CDH6P55285 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH6P55285 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH6P55285 MTND2P2-201ENST00000434633 945 ntBASIC4.57□□□□□ -1.68
CDH6P55285 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH6P55285 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH6P55285 ARL4AP1-201ENST00000503220 705 ntBASIC4.57□□□□□ -1.68
CDH6P55285 RN7SKP92-201ENST00000517266 244 ntBASIC4.57□□□□□ -1.68
CDH6P55285 AC008694.2-201ENST00000517591 306 ntBASIC4.57□□□□□ -1.68
CDH6P55285 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH6P55285 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH6P55285 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH6P55285 AC115286.1-201ENST00000604298 434 ntBASIC4.57□□□□□ -1.68
CDH6P55285 AC019131.2-201ENST00000609071 870 ntBASIC4.57□□□□□ -1.68
CDH6P55285 MIR7703-201ENST00000620784 77 ntBASIC4.57□□□□□ -1.68
CDH6P55285 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH6P55285 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH6P55285 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDH6P55285 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH6P55285 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH6P55285 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH6P55285 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH6P55285 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CDH6P55285 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 ASNSP1-201ENST00000518311 1939 ntBASIC4.56□□□□□ -1.68
CDH6P55285 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH6P55285 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CDH6P55285 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH6P55285 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
CDH6P55285 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH6P55285 RNA5SP505-201ENST00000364748 108 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH6P55285 MIR129-1-201ENST00000384972 72 ntBASIC4.56□□□□□ -1.68
CDH6P55285 MIR1911-201ENST00000410783 80 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC073335.1-201ENST00000427776 363 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC114495.1-201ENST00000441274 436 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH6P55285 AC243772.1-201ENST00000451620 410 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH6P55285 AC053481.1-201ENST00000467217 306 ntBASIC4.56□□□□□ -1.68
CDH6P55285 RPS23P1-201ENST00000491662 432 ntBASIC4.56□□□□□ -1.68
CDH6P55285 HAUS1P1-201ENST00000505275 832 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC111000.3-201ENST00000508057 576 ntBASIC4.56□□□□□ -1.68
CDH6P55285 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH6P55285 ATP1B1P1-201ENST00000509767 915 ntBASIC4.56□□□□□ -1.68
CDH6P55285 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH6P55285 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH6P55285 CDH12P4-201ENST00000517835 295 ntBASIC4.56□□□□□ -1.68
CDH6P55285 CDH12P3-201ENST00000517935 295 ntBASIC4.56□□□□□ -1.68
CDH6P55285 CDH12P1-201ENST00000518435 295 ntBASIC4.56□□□□□ -1.68
CDH6P55285 IGLV3-26-201ENST00000520756 302 ntBASIC4.56□□□□□ -1.68
CDH6P55285 FAM60CP-201ENST00000591086 664 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC234771.5-201ENST00000600161 514 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC005034.4-201ENST00000603612 899 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC093765.1-201ENST00000603758 881 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC019193.2-201ENST00000610012 634 ntBASIC4.56□□□□□ -1.68
CDH6P55285 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH6P55285 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH6P55285 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
CDH6P55285 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 AC017104.4-201ENST00000636283 1592 ntBASIC4.56□□□□□ -1.68
CDH6P55285 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH6P55285 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CDH6P55285 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.56□□□□□ -1.68
CDH6P55285 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH6P55285 AL132640.2-201ENST00000559968 1698 ntBASIC4.55□□□□□ -1.68
CDH6P55285 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDH6P55285 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH6P55285 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDH6P55285 AC008033.1-201ENST00000216407 1162 ntBASIC4.55□□□□□ -1.68
CDH6P55285 MIR585-201ENST00000384887 94 ntBASIC4.55□□□□□ -1.68
CDH6P55285 MIR3065-201ENST00000390137 79 ntBASIC4.55□□□□□ -1.68
CDH6P55285 VN1R8P-201ENST00000407739 893 ntBASIC4.55□□□□□ -1.68
CDH6P55285 RN7SKP216-201ENST00000411050 312 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms