Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL121878.1-201ENST00000418638 859 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCN3P51790 SFR1P2-201ENST00000421841 730 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 RPL7P57-201ENST00000423238 740 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 VN1R42P-201ENST00000424651 344 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCN3P51790 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCN3P51790 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCN3P51790 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCN3P51790 RPS27P5-201ENST00000444247 244 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CLCN3P51790 PSMC1P13-201ENST00000458195 985 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 RPL32P14-201ENST00000463196 378 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC090142.1-201ENST00000465776 462 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC104763.1-201ENST00000475274 360 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC090686.1-201ENST00000481577 749 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 CDH12P2-201ENST00000504393 298 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CLCN3P51790 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC007016.1-201ENST00000512110 244 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 RN7SKP141-201ENST00000516167 338 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 RNU6-415P-201ENST00000516252 97 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 RNU6-334P-201ENST00000517072 102 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.15□□□□□ -1.59
CLCN3P51790 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCN3P51790 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCN3P51790 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.15□□□□□ -1.59
CLCN3P51790 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCN3P51790 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCN3P51790 MIR4277-201ENST00000578298 84 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AP005119.2-201ENST00000579735 1105 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC124283.4-201ENST00000581815 456 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC133794.1-201ENST00000602731 914 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AL133338.2-201ENST00000604292 736 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AL451049.1-201ENST00000608672 497 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AL391834.1-201ENST00000609609 560 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC016957.2-201ENST00000616998 848 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC073869.7-201ENST00000640874 297 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 AC119674.1-212ENST00000641155 993 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCN3P51790 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CLCN3P51790 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCN3P51790 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 ZNF137P-201ENST00000456718 1920 ntBASIC5.15□□□□□ -1.59
CLCN3P51790 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CLCN3P51790 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCN3P51790 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CLCN3P51790 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCN3P51790 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCN3P51790 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCN3P51790 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLCN3P51790 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 ZFRP1-201ENST00000457579 2970 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCN3P51790 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CLCN3P51790 OR14L1P-202ENST00000641545 3009 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC021146.4-201ENST00000309229 279 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 FAM3C2-201ENST00000312214 681 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 OR4K17-201ENST00000315543 1032 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 MIR16-2-201ENST00000362117 81 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 SNORA71.2-201ENST00000364941 134 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 MIR659-201ENST00000384963 97 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AL136131.1-201ENST00000406079 803 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 XKRYP4-201ENST00000414395 483 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCN3P51790 AL732292.1-201ENST00000426692 226 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCN3P51790 MTCYBP21-201ENST00000443300 1113 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLCN3P51790 BTF3P6-201ENST00000448054 499 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 XKRYP5-201ENST00000449659 483 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC037198.2-201ENST00000478845 733 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC112518.2-201ENST00000508565 425 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCN3P51790 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCN3P51790 RNU6-1308P-201ENST00000516817 103 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.14□□□□□ -1.59
CLCN3P51790 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.14□□□□□ -1.59
CLCN3P51790 AC009643.1-201ENST00000532030 391 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.14□□□□□ -1.59
CLCN3P51790 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.14□□□□□ -1.59
CLCN3P51790 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCN3P51790 AC104229.1-201ENST00000561364 255 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC122134.1-201ENST00000565664 1104 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCN3P51790 AC069061.3-201ENST00000582254 823 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC245884.10-201ENST00000597355 337 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCN3P51790 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.14□□□□□ -1.59
CLCN3P51790 AL121873.1-201ENST00000616013 524 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 AC093875.1-201ENST00000623688 504 ntBASIC5.14□□□□□ -1.59
CLCN3P51790 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLCN3P51790 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms