Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.21□□□□□ -1.74
RFC3P40938 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.21□□□□□ -1.74
RFC3P40938 AC026979.4-201ENST00000606555 645 ntBASIC4.21□□□□□ -1.74
RFC3P40938 AL133243.1-201ENST00000614487 366 ntBASIC4.21□□□□□ -1.74
RFC3P40938 AC006453.5-201ENST00000636451 619 ntBASIC4.21□□□□□ -1.74
RFC3P40938 AL445487.1-201ENST00000415694 1580 ntBASIC4.21□□□□□ -1.74
RFC3P40938 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFC3P40938 AC107027.3-201ENST00000565095 3473 ntBASIC4.21□□□□□ -1.74
RFC3P40938 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RFC3P40938 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.21□□□□□ -1.74
RFC3P40938 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFC3P40938 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.21□□□□□ -1.74
RFC3P40938 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
RFC3P40938 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 AC017104.4-201ENST00000636283 1592 ntBASIC4.2□□□□□ -1.74
RFC3P40938 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RFC3P40938 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
RFC3P40938 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 MIR448-201ENST00000362131 111 ntBASIC4.2□□□□□ -1.74
RFC3P40938 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.2□□□□□ -1.74
RFC3P40938 MIR708-201ENST00000390708 88 ntBASIC4.2□□□□□ -1.74
RFC3P40938 RNA5SP372-201ENST00000390836 115 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AL049693.1-201ENST00000402760 611 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.2□□□□□ -1.74
RFC3P40938 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.2□□□□□ -1.74
RFC3P40938 ARAFP1-201ENST00000422172 605 ntBASIC4.2□□□□□ -1.74
RFC3P40938 CHIAP3-201ENST00000423668 1133 ntBASIC4.2□□□□□ -1.74
RFC3P40938 RPL12P28-201ENST00000430852 489 ntBASIC4.2□□□□□ -1.74
RFC3P40938 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.2□□□□□ -1.74
RFC3P40938 RPL23AP93-201ENST00000440847 484 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AL162591.2-201ENST00000449634 317 ntBASIC4.2□□□□□ -1.74
RFC3P40938 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.2□□□□□ -1.74
RFC3P40938 RN7SL817P-201ENST00000480777 288 ntBASIC4.2□□□□□ -1.74
RFC3P40938 LARP7P4-201ENST00000481075 878 ntBASIC4.2□□□□□ -1.74
RFC3P40938 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 AC083829.1-201ENST00000503756 657 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AC098799.3-201ENST00000506095 438 ntBASIC4.2□□□□□ -1.74
RFC3P40938 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
RFC3P40938 AC093840.1-201ENST00000511599 336 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.2□□□□□ -1.74
RFC3P40938 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.2□□□□□ -1.74
RFC3P40938 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.2□□□□□ -1.74
RFC3P40938 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.2□□□□□ -1.74
RFC3P40938 AC084783.1-201ENST00000565846 910 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.2□□□□□ -1.74
RFC3P40938 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.2□□□□□ -1.74
RFC3P40938 FAM60CP-201ENST00000591086 664 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.2□□□□□ -1.74
RFC3P40938 IMMP1LP1-201ENST00000605170 488 ntBASIC4.2□□□□□ -1.74
RFC3P40938 MLECP1-201ENST00000615893 709 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.2□□□□□ -1.74
RFC3P40938 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.2□□□□□ -1.74
RFC3P40938 AC055839.1-201ENST00000634467 498 ntBASIC4.2□□□□□ -1.74
RFC3P40938 OR52H1-202ENST00000641796 1061 ntBASIC4.2□□□□□ -1.74
RFC3P40938 AL391684.1-202ENST00000641293 1636 ntBASIC4.2□□□□□ -1.74
RFC3P40938 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFC3P40938 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RFC3P40938 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RFC3P40938 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
RFC3P40938 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.19□□□□□ -1.74
RFC3P40938 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.19□□□□□ -1.74
RFC3P40938 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 GCNT6-201ENST00000379591 934 ntBASIC4.19□□□□□ -1.74
RFC3P40938 SNORD96B-201ENST00000386148 79 ntBASIC4.19□□□□□ -1.74
RFC3P40938 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.19□□□□□ -1.74
RFC3P40938 AP000580.1-201ENST00000404439 358 ntBASIC4.19□□□□□ -1.74
RFC3P40938 HDGFP1-201ENST00000405943 252 ntBASIC4.19□□□□□ -1.74
RFC3P40938 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.19□□□□□ -1.74
RFC3P40938 RNU4-25P-201ENST00000410569 230 ntBASIC4.19□□□□□ -1.74
RFC3P40938 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.19□□□□□ -1.74
RFC3P40938 RPL7P57-201ENST00000423238 740 ntBASIC4.19□□□□□ -1.74
RFC3P40938 MTND2P2-201ENST00000434633 945 ntBASIC4.19□□□□□ -1.74
RFC3P40938 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.19□□□□□ -1.74
RFC3P40938 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.19□□□□□ -1.74
RFC3P40938 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.19□□□□□ -1.74
RFC3P40938 Z95152.1-201ENST00000453556 656 ntBASIC4.19□□□□□ -1.74
RFC3P40938 AL121877.1-201ENST00000453704 622 ntBASIC4.19□□□□□ -1.74
RFC3P40938 AC133473.1-201ENST00000455173 299 ntBASIC4.19□□□□□ -1.74
RFC3P40938 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.19□□□□□ -1.74
RFC3P40938 RPS23P7-201ENST00000466210 444 ntBASIC4.19□□□□□ -1.74
RFC3P40938 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
RFC3P40938 AK4P6-201ENST00000505168 528 ntBASIC4.19□□□□□ -1.74
RFC3P40938 VWA8P1-201ENST00000510889 176 ntBASIC4.19□□□□□ -1.74
RFC3P40938 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.19□□□□□ -1.74
RFC3P40938 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.19□□□□□ -1.74
RFC3P40938 NPM1P6-201ENST00000521088 871 ntBASIC4.19□□□□□ -1.74
RFC3P40938 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.19□□□□□ -1.74
RFC3P40938 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFC3P40938 AC068831.4-201ENST00000556118 109 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms