Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXD13P35453 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HOXD13P35453 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD13P35453 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD13P35453 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD13P35453 AL031119.1-201ENST00000404707 1879 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD13P35453 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 AC010928.1-201ENST00000592477 1447 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD13P35453 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
HOXD13P35453 SNORA74A-201ENST00000364089 198 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 UBBP2-201ENST00000376781 231 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 ATF1P1-201ENST00000406040 927 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD13P35453 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD13P35453 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXD13P35453 NMNAT1P2-201ENST00000435192 860 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 RPL35AP28-201ENST00000459730 331 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 AC092324.1-201ENST00000468671 324 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 RPL21P47-201ENST00000483696 477 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD13P35453 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HOXD13P35453 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXD13P35453 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD13P35453 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD13P35453 RN7SKP276-201ENST00000516242 268 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 RNU1-6P-201ENST00000516290 144 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 SMARCE1P4-201ENST00000523647 241 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXD13P35453 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD13P35453 AC106785.3-201ENST00000564064 847 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD13P35453 AC106734.1-201ENST00000568646 663 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 AC015912.2-201ENST00000571053 181 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 MIR3667-201ENST00000581025 74 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 AC124283.4-201ENST00000581815 456 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD13P35453 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD13P35453 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXD13P35453 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD13P35453 AL672167.1-205ENST00000641112 3080 ntBASIC5.18□□□□□ -1.58
HOXD13P35453 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXD13P35453 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 MAPK10-304ENST00000641341 3984 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
HOXD13P35453 AL672167.1-203ENST00000641299 2975 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HOXD13P35453 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXD13P35453 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXD13P35453 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXD13P35453 MTND4P11-201ENST00000417020 1058 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXD13P35453 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXD13P35453 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 MRPL48P1-201ENST00000445390 636 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 AL049829.1-201ENST00000465411 156 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 MTND6P6-201ENST00000478031 263 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 AC121161.1-201ENST00000510606 652 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXD13P35453 AC107918.3-201ENST00000533272 382 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXD13P35453 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXD13P35453 AC027104.1-201ENST00000563702 681 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 UBE2FP2-201ENST00000566646 462 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXD13P35453 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXD13P35453 AC209154.1-201ENST00000582156 337 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXD13P35453 AL512782.1-201ENST00000603093 364 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 RNF138P2-201ENST00000603490 592 ntBASIC5.17□□□□□ -1.58
HOXD13P35453 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXD13P35453 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HOXD13P35453 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD13P35453 ZFRP1-201ENST00000457579 2970 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD13P35453 AL133268.1-201ENST00000405676 1401 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD13P35453 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD13P35453 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD13P35453 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD13P35453 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD13P35453 AC083843.2-201ENST00000568248 6253 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXD13P35453 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HOXD13P35453 OR52E6-202ENST00000379946 954 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms