Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HOXC12P31275 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC12P31275 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.72□□□□□ -1.49
HOXC12P31275 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC12P31275 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC12P31275 AC125238.2-201ENST00000430003 1440 ntBASIC5.72□□□□□ -1.49
HOXC12P31275 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC12P31275 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC12P31275 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC12P31275 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HOXC12P31275 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC12P31275 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HOXC12P31275 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.71□□□□□ -1.49
HOXC12P31275 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.71□□□□□ -1.49
HOXC12P31275 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC12P31275 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC12P31275 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC12P31275 AC012254.3-201ENST00000591183 2117 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 TCP11X1-202ENST00000622971 1372 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC12P31275 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 ELF2P3-201ENST00000445099 1506 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC12P31275 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC12P31275 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 SNRPEP2-201ENST00000397592 279 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 RPL5P20-201ENST00000403848 896 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 SNORA77.2-201ENST00000408571 112 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 RN7SKP206-201ENST00000410823 293 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AL356583.2-201ENST00000426536 280 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 HSPD1P12-201ENST00000429127 1069 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC12P31275 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AC010881.1-201ENST00000433830 235 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AC011742.2-201ENST00000443818 352 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC12P31275 AC098824.1-201ENST00000453565 980 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 MEMO1P3-201ENST00000459811 302 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 RN7SL39P-201ENST00000462264 297 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AC097493.1-201ENST00000463958 372 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 RPS3AP17-201ENST00000472594 777 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AC074386.1-201ENST00000476560 767 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 RPL7AP10-201ENST00000481016 791 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 KLRA1P-201ENST00000503499 986 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 OR7E99P-201ENST00000505750 922 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AC026412.2-201ENST00000512270 1075 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 RPS27AP18-201ENST00000515536 459 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 SCARNA5-201ENST00000516201 276 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 SCARNA21.2-201ENST00000516600 166 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC12P31275 IGHV3-57-201ENST00000520143 280 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 CYCSP25-201ENST00000525280 316 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC12P31275 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC12P31275 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 AL589863.1-201ENST00000595383 631 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 BNIP3P8-201ENST00000597863 560 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 BNIP3P23-201ENST00000599655 511 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AC027243.2-201ENST00000602530 724 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 IMMP1LP1-201ENST00000605170 488 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AL139089.1-201ENST00000620372 975 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC12P31275 AC138649.3-201ENST00000622154 254 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC12P31275 CRYM-AS1-204ENST00000637983 556 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXC12P31275 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC12P31275 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC12P31275 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXC12P31275 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC12P31275 GDI2P1-201ENST00000429312 1336 ntBASIC5.71□□□□□ -1.5
HOXC12P31275 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXC12P31275 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC12P31275 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXC12P31275 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms