Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA9P31269 RN7SL812P-201ENST00000493791 279 ntBASIC4.65□□□□□ -1.67
HOXA9P31269 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXA9P31269 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXA9P31269 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA9P31269 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA9P31269 IMMP1LP1-201ENST00000605170 488 ntBASIC4.65□□□□□ -1.67
HOXA9P31269 AL591034.3-201ENST00000605511 685 ntBASIC4.65□□□□□ -1.67
HOXA9P31269 AC090506.2-201ENST00000624521 419 ntBASIC4.65□□□□□ -1.67
HOXA9P31269 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA9P31269 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA9P31269 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA9P31269 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXA9P31269 AL133268.1-201ENST00000405676 1401 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA9P31269 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HOXA9P31269 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA9P31269 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA9P31269 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA9P31269 MIR331-201ENST00000362302 94 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC019155.1-201ENST00000382242 574 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 NCSTNP1-201ENST00000406229 144 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC009302.1-201ENST00000417147 390 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 AL139095.3-201ENST00000419672 1203 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 RPL23AP38-201ENST00000423801 469 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 COX6CP15-201ENST00000426313 211 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AL132765.1-201ENST00000434165 553 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 OR4C10P-201ENST00000434991 931 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 RN7SL691P-201ENST00000494487 301 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 RN7SKP46-201ENST00000515942 234 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.64□□□□□ -1.67
HOXA9P31269 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXA9P31269 AP003497.2-201ENST00000624220 967 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA9P31269 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HOXA9P31269 AC123912.3-201ENST00000600907 1367 ntBASIC4.64□□□□□ -1.67
HOXA9P31269 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA9P31269 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HOXA9P31269 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXA9P31269 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HOXA9P31269 VPS35P1-201ENST00000563400 1518 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
HOXA9P31269 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.63□□□□□ -1.67
HOXA9P31269 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HOXA9P31269 SNORA37-201ENST00000384504 129 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 PPIAP31-201ENST00000405422 495 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 AC122718.1-201ENST00000439448 744 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 FAM133DP-201ENST00000464802 691 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 AC108751.2-201ENST00000469993 231 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 UBA52P3-201ENST00000491303 382 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXA9P31269 AC008958.1-201ENST00000511047 682 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXA9P31269 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXA9P31269 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXA9P31269 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 PDCD5P1-201ENST00000543528 309 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 MIR1254-2-201ENST00000579553 63 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 HMGB2P1-201ENST00000591146 634 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 AC130352.1-201ENST00000602979 661 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 AC025175.1-201ENST00000606482 759 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXA9P31269 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXA9P31269 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 AL158163.1-201ENST00000603915 1649 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXA9P31269 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXA9P31269 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXA9P31269 LARP1BP1-201ENST00000506036 1359 ntBASIC4.63□□□□□ -1.67
HOXA9P31269 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA9P31269 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA9P31269 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXA9P31269 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA9P31269 AC139769.1-204ENST00000472297 1931 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms