Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.04□□□□□ -1.76
CD40LGP29965 MTND2P25-201ENST00000449028 610 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD40LGP29965 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD40LGP29965 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.04□□□□□ -1.76
CD40LGP29965 COPS8P2-201ENST00000473228 627 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 AC109462.1-201ENST00000491087 368 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD40LGP29965 AC006499.3-201ENST00000506077 748 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.04□□□□□ -1.76
CD40LGP29965 MIR2114-201ENST00000516645 80 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 OR5AZ1P-201ENST00000527448 943 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.04□□□□□ -1.76
CD40LGP29965 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.04□□□□□ -1.76
CD40LGP29965 NMNAT1P1-201ENST00000554095 876 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40LGP29965 MIR4489-201ENST00000578869 62 ntBASIC4.04□□□□□ -1.76
CD40LGP29965 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40LGP29965 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40LGP29965 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.04□□□□□ -1.76
CD40LGP29965 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40LGP29965 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CD40LGP29965 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD40LGP29965 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD40LGP29965 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.04□□□□□ -1.76
CD40LGP29965 SAMMSON-226ENST00000642089 1582 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 CR788268.1-201ENST00000603931 1809 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD40LGP29965 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD40LGP29965 RNA5SP322-201ENST00000363617 119 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CD40LGP29965 GLULP6-201ENST00000399502 913 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 FCF1P5-201ENST00000406490 482 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 RN7SKP56-201ENST00000410513 331 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 AMD1P2-201ENST00000412936 992 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CD40LGP29965 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.03□□□□□ -1.76
CD40LGP29965 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.03□□□□□ -1.76
CD40LGP29965 GLUD1P9-201ENST00000420997 1173 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.03□□□□□ -1.76
CD40LGP29965 CDY14P-201ENST00000431260 1014 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.03□□□□□ -1.76
CD40LGP29965 CDY12P-201ENST00000440679 1015 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 CDY13P-201ENST00000445813 1015 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 CDY23P-201ENST00000451661 1014 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.03□□□□□ -1.76
CD40LGP29965 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.03□□□□□ -1.76
CD40LGP29965 AP000926.1-201ENST00000479573 241 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.03□□□□□ -1.76
CD40LGP29965 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.03□□□□□ -1.76
CD40LGP29965 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.03□□□□□ -1.76
CD40LGP29965 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CD40LGP29965 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.03□□□□□ -1.76
CD40LGP29965 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 AC011447.4-201ENST00000587562 111 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 AL353662.3-201ENST00000625131 237 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.03□□□□□ -1.76
CD40LGP29965 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD40LGP29965 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 MFSD8-220ENST00000641243 1422 ntBASIC4.03□□□□□ -1.76
CD40LGP29965 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.03□□□□□ -1.76
CD40LGP29965 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CD40LGP29965 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CD40LGP29965 THAP12P4-201ENST00000528321 2266 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CD40LGP29965 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.02□□□□□ -1.77
CD40LGP29965 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CD40LGP29965 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.02□□□□□ -1.77
CD40LGP29965 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.02□□□□□ -1.77
CD40LGP29965 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CD40LGP29965 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CD40LGP29965 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CD40LGP29965 RN7SKP115-201ENST00000363177 317 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CD40LGP29965 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CD40LGP29965 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.02□□□□□ -1.77
CD40LGP29965 RPL31P52-201ENST00000407532 367 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 U3.36-201ENST00000408418 213 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 RN7SKP222-201ENST00000410651 315 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 RN7SKP213-201ENST00000410746 298 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 TRGV6-201ENST00000417928 299 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.02□□□□□ -1.77
CD40LGP29965 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.02□□□□□ -1.77
CD40LGP29965 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.02□□□□□ -1.77
CD40LGP29965 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.02□□□□□ -1.77
CD40LGP29965 KNOP1P3-201ENST00000446933 426 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.02□□□□□ -1.77
CD40LGP29965 AC097484.1-201ENST00000471148 389 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 AC010683.1-201ENST00000473673 378 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 AC116562.1-201ENST00000485355 781 ntBASIC4.02□□□□□ -1.77
CD40LGP29965 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CD40LGP29965 RPS4XP14-201ENST00000493072 781 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms