Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF1P22415 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF1P22415 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
USF1P22415 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.95□□□□□ -1.78
USF1P22415 BX005019.1-201ENST00000561881 1810 ntBASIC3.95□□□□□ -1.78
USF1P22415 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 DHX9P1-201ENST00000436565 3076 ntBASIC3.95□□□□□ -1.78
USF1P22415 CASC19-284ENST00000642142 1868 ntBASIC3.95□□□□□ -1.78
USF1P22415 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USF1P22415 RNU1-82P-201ENST00000390851 165 ntBASIC3.95□□□□□ -1.78
USF1P22415 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.95□□□□□ -1.78
USF1P22415 AC004690.1-201ENST00000418216 328 ntBASIC3.95□□□□□ -1.78
USF1P22415 AC140479.3-201ENST00000418944 1126 ntBASIC3.95□□□□□ -1.78
USF1P22415 CHIAP3-201ENST00000423668 1133 ntBASIC3.95□□□□□ -1.78
USF1P22415 CKS1BP6-201ENST00000424932 240 ntBASIC3.95□□□□□ -1.78
USF1P22415 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.95□□□□□ -1.78
USF1P22415 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 RPS26P4-201ENST00000431743 355 ntBASIC3.95□□□□□ -1.78
USF1P22415 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.95□□□□□ -1.78
USF1P22415 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.95□□□□□ -1.78
USF1P22415 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.95□□□□□ -1.78
USF1P22415 PPIAP21-201ENST00000464473 501 ntBASIC3.95□□□□□ -1.78
USF1P22415 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.95□□□□□ -1.78
USF1P22415 AC083829.1-201ENST00000503756 657 ntBASIC3.95□□□□□ -1.78
USF1P22415 HMGB3P13-201ENST00000511263 607 ntBASIC3.95□□□□□ -1.78
USF1P22415 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.95□□□□□ -1.78
USF1P22415 AC015795.1-201ENST00000513669 327 ntBASIC3.95□□□□□ -1.78
USF1P22415 RNA5SP464-201ENST00000516251 108 ntBASIC3.95□□□□□ -1.78
USF1P22415 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.95□□□□□ -1.78
USF1P22415 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.95□□□□□ -1.78
USF1P22415 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.95□□□□□ -1.78
USF1P22415 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.95□□□□□ -1.78
USF1P22415 AC084373.1-201ENST00000603311 235 ntBASIC3.95□□□□□ -1.78
USF1P22415 AC097505.1-201ENST00000610199 565 ntBASIC3.95□□□□□ -1.78
USF1P22415 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 AP005019.3-201ENST00000620418 560 ntBASIC3.95□□□□□ -1.78
USF1P22415 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.95□□□□□ -1.78
USF1P22415 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.95□□□□□ -1.78
USF1P22415 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 ZNF137P-201ENST00000456718 1920 ntBASIC3.95□□□□□ -1.78
USF1P22415 AC009643.2-201ENST00000603543 1448 ntBASIC3.95□□□□□ -1.78
USF1P22415 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF1P22415 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.95□□□□□ -1.78
USF1P22415 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF1P22415 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
USF1P22415 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
USF1P22415 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF1P22415 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF1P22415 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USF1P22415 AL034374.1-201ENST00000406329 351 ntBASIC3.94□□□□□ -1.78
USF1P22415 RNU4-25P-201ENST00000410569 230 ntBASIC3.94□□□□□ -1.78
USF1P22415 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.94□□□□□ -1.78
USF1P22415 AL592293.2-201ENST00000422292 996 ntBASIC3.94□□□□□ -1.78
USF1P22415 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 AJ239321.1-201ENST00000424255 564 ntBASIC3.94□□□□□ -1.78
USF1P22415 EIF4HP2-201ENST00000424380 563 ntBASIC3.94□□□□□ -1.78
USF1P22415 NPM1P26-201ENST00000426339 738 ntBASIC3.94□□□□□ -1.78
USF1P22415 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.94□□□□□ -1.78
USF1P22415 AC023141.6-201ENST00000429418 337 ntBASIC3.94□□□□□ -1.78
USF1P22415 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USF1P22415 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.94□□□□□ -1.78
USF1P22415 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 TCP11X3P-202ENST00000514289 1254 ntBASIC3.94□□□□□ -1.78
USF1P22415 RNU6-709P-201ENST00000517257 104 ntBASIC3.94□□□□□ -1.78
USF1P22415 AC008676.3-201ENST00000521237 435 ntBASIC3.94□□□□□ -1.78
USF1P22415 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
USF1P22415 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 BMS1P7-201ENST00000602440 1052 ntBASIC3.94□□□□□ -1.78
USF1P22415 AL133338.2-201ENST00000604292 736 ntBASIC3.94□□□□□ -1.78
USF1P22415 SNORD91B-202ENST00000608459 222 ntBASIC3.94□□□□□ -1.78
USF1P22415 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.94□□□□□ -1.78
USF1P22415 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.94□□□□□ -1.78
USF1P22415 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.94□□□□□ -1.78
USF1P22415 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USF1P22415 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.94□□□□□ -1.78
USF1P22415 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF1P22415 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF1P22415 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USF1P22415 SALL4P2-201ENST00000423288 2910 ntBASIC3.94□□□□□ -1.78
USF1P22415 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 AC108467.2-201ENST00000617640 1597 ntBASIC3.93□□□□□ -1.78
USF1P22415 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms