Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Z80107.2-201ENST00000445127 392 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 SLC25A18P1-201ENST00000449385 454 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AL691482.1-201ENST00000453255 87 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AC063943.1-201ENST00000465434 453 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AC090686.1-201ENST00000481577 749 ntBASIC4.76□□□□□ -1.65
CDH3P22223 RN7SL205P-201ENST00000490174 284 ntBASIC4.76□□□□□ -1.65
CDH3P22223 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH3P22223 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH3P22223 AC004923.2-201ENST00000529649 369 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH3P22223 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH3P22223 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 BGLT3-201ENST00000564523 994 ntBASIC4.76□□□□□ -1.65
CDH3P22223 HNRNPCP4-201ENST00000571636 900 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH3P22223 AC015911.5-201ENST00000587076 451 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH3P22223 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 AL049794.2-201ENST00000616301 365 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AC073342.3-201ENST00000624211 193 ntBASIC4.76□□□□□ -1.65
CDH3P22223 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH3P22223 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 TLK1P1-201ENST00000456760 2440 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AC114546.3-201ENST00000623582 1734 ntBASIC4.75□□□□□ -1.65
CDH3P22223 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH3P22223 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CDH3P22223 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH3P22223 SAMMSON-226ENST00000642089 1582 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AL133268.1-201ENST00000405676 1401 ntBASIC4.75□□□□□ -1.65
CDH3P22223 CYP1D1P-201ENST00000416662 1433 ntBASIC4.75□□□□□ -1.65
CDH3P22223 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH3P22223 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDH3P22223 SNORA73.1-201ENST00000363107 205 ntBASIC4.75□□□□□ -1.65
CDH3P22223 RNU6-609P-201ENST00000365459 107 ntBASIC4.75□□□□□ -1.65
CDH3P22223 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH3P22223 RNU6-146P-201ENST00000384602 108 ntBASIC4.75□□□□□ -1.65
CDH3P22223 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH3P22223 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH3P22223 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
CDH3P22223 RPL37P18-201ENST00000411602 243 ntBASIC4.75□□□□□ -1.65
CDH3P22223 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH3P22223 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH3P22223 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 AL450023.3-201ENST00000440592 271 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AL162388.1-201ENST00000450912 352 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 CALM1P2-201ENST00000452941 448 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AC093166.2-201ENST00000455969 1017 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AC105233.1-201ENST00000498840 781 ntBASIC4.75□□□□□ -1.65
CDH3P22223 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH3P22223 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
CDH3P22223 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 AC090819.1-201ENST00000523800 1111 ntBASIC4.75□□□□□ -1.65
CDH3P22223 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 AC023158.1-201ENST00000561632 1025 ntBASIC4.75□□□□□ -1.65
CDH3P22223 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH3P22223 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH3P22223 AC068020.1-201ENST00000594215 661 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AC130352.1-201ENST00000602979 661 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AC009237.17-201ENST00000618111 748 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AC090617.9-201ENST00000623751 147 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AL592494.2-201ENST00000425455 1548 ntBASIC4.75□□□□□ -1.65
CDH3P22223 AC092435.4-201ENST00000623012 4159 ntBASIC4.75□□□□□ -1.65
CDH3P22223 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDH3P22223 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH3P22223 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH3P22223 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH3P22223 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH3P22223 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH3P22223 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH3P22223 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CDH3P22223 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CDH3P22223 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH3P22223 SDAD1P1-202ENST00000524156 2051 ntBASIC4.74□□□□□ -1.65
CDH3P22223 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH3P22223 AL049555.1-201ENST00000562834 1933 ntBASIC4.74□□□□□ -1.65
CDH3P22223 Z73965.1-201ENST00000623412 2297 ntBASIC4.74□□□□□ -1.65
CDH3P22223 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH3P22223 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH3P22223 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH3P22223 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH3P22223 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH3P22223 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.74□□□□□ -1.65
CDH3P22223 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms