Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TPM1P09493 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM1P09493 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM1P09493 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM1P09493 AC110792.3-201ENST00000595906 1614 ntBASIC4.83□□□□□ -1.64
TPM1P09493 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM1P09493 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM1P09493 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM1P09493 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TPM1P09493 RNA5SP191-201ENST00000362585 102 ntBASIC4.82□□□□□ -1.64
TPM1P09493 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM1P09493 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM1P09493 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM1P09493 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.82□□□□□ -1.64
TPM1P09493 AL049745.1-201ENST00000433953 286 ntBASIC4.82□□□□□ -1.64
TPM1P09493 AC005154.2-201ENST00000438110 379 ntBASIC4.82□□□□□ -1.64
TPM1P09493 SUMO2P1-206ENST00000445436 284 ntBASIC4.82□□□□□ -1.64
TPM1P09493 ABCF2P2-201ENST00000450549 296 ntBASIC4.82□□□□□ -1.64
TPM1P09493 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM1P09493 AL133477.1-201ENST00000457472 514 ntBASIC4.82□□□□□ -1.64
TPM1P09493 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM1P09493 VTA1P2-201ENST00000520205 911 ntBASIC4.82□□□□□ -1.64
TPM1P09493 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM1P09493 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TPM1P09493 AC005000.1-201ENST00000536192 288 ntBASIC4.82□□□□□ -1.64
TPM1P09493 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.82□□□□□ -1.64
TPM1P09493 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.82□□□□□ -1.64
TPM1P09493 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.82□□□□□ -1.64
TPM1P09493 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM1P09493 ELOCP28-201ENST00000590044 317 ntBASIC4.82□□□□□ -1.64
TPM1P09493 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM1P09493 AC116447.1-201ENST00000613153 453 ntBASIC4.82□□□□□ -1.64
TPM1P09493 AC022467.1-201ENST00000614738 749 ntBASIC4.82□□□□□ -1.64
TPM1P09493 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TPM1P09493 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM1P09493 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TPM1P09493 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.81□□□□□ -1.64
TPM1P09493 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TPM1P09493 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 CYP1D1P-201ENST00000416662 1433 ntBASIC4.81□□□□□ -1.64
TPM1P09493 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.81□□□□□ -1.64
TPM1P09493 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 USP9YP4-201ENST00000424401 1745 ntBASIC4.81□□□□□ -1.64
TPM1P09493 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
TPM1P09493 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TPM1P09493 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TPM1P09493 RNU6-697P-201ENST00000363348 107 ntBASIC4.81□□□□□ -1.64
TPM1P09493 ZNF603P-201ENST00000405613 487 ntBASIC4.81□□□□□ -1.64
TPM1P09493 RNU6-603P-201ENST00000411403 107 ntBASIC4.81□□□□□ -1.64
TPM1P09493 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.81□□□□□ -1.64
TPM1P09493 ARAFP1-201ENST00000422172 605 ntBASIC4.81□□□□□ -1.64
TPM1P09493 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 AL132765.1-201ENST00000434165 553 ntBASIC4.81□□□□□ -1.64
TPM1P09493 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM1P09493 AC063943.1-201ENST00000465434 453 ntBASIC4.81□□□□□ -1.64
TPM1P09493 RN7SL812P-201ENST00000493791 279 ntBASIC4.81□□□□□ -1.64
TPM1P09493 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TPM1P09493 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM1P09493 RNA5SP34-201ENST00000516887 130 ntBASIC4.81□□□□□ -1.64
TPM1P09493 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM1P09493 AC090819.1-201ENST00000523800 1111 ntBASIC4.81□□□□□ -1.64
TPM1P09493 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TPM1P09493 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM1P09493 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TPM1P09493 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM1P09493 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.81□□□□□ -1.64
TPM1P09493 AL359715.5-201ENST00000623431 443 ntBASIC4.81□□□□□ -1.64
TPM1P09493 AC006065.6-201ENST00000625201 545 ntBASIC4.81□□□□□ -1.64
TPM1P09493 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.81□□□□□ -1.64
TPM1P09493 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM1P09493 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM1P09493 SDAD1P1-202ENST00000524156 2051 ntBASIC4.81□□□□□ -1.64
TPM1P09493 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM1P09493 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM1P09493 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM1P09493 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TPM1P09493 AC021146.4-201ENST00000309229 279 ntBASIC4.8□□□□□ -1.64
TPM1P09493 RNA5SP507-201ENST00000363603 121 ntBASIC4.8□□□□□ -1.64
TPM1P09493 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TPM1P09493 RN7SKP100-201ENST00000411258 284 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM1P09493 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM1P09493 AC092647.1-201ENST00000420654 287 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AC234779.1-201ENST00000425910 285 ntBASIC4.8□□□□□ -1.64
TPM1P09493 NPM1P26-201ENST00000426339 738 ntBASIC4.8□□□□□ -1.64
TPM1P09493 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM1P09493 UBE2V1P3-201ENST00000439651 417 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms