Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 ZNF652P1-201ENST00000442420 1309 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 RNU6-1214P-201ENST00000363650 109 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 Y_RNA.436-201ENST00000384097 102 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 HMGB1P13-201ENST00000406019 642 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 RPS16P5-201ENST00000406501 404 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 U3.32-201ENST00000408116 212 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL031779.1-201ENST00000415663 330 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 USP9YP11-201ENST00000427537 717 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 MTND6P5-201ENST00000448266 512 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL513533.1-201ENST00000453728 415 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC008280.2-201ENST00000455473 307 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 RPL23AP56-201ENST00000460778 453 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 SYT14P1-201ENST00000481459 721 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC011005.3-201ENST00000491624 395 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 RPS27AP16-201ENST00000492222 470 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC021146.7-201ENST00000509604 775 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 CBX3P2-202ENST00000583365 535 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 PRPF19P1-201ENST00000584766 898 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AP004372.1-201ENST00000604842 844 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL133507.1-201ENST00000605269 557 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL392048.1-201ENST00000613946 534 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC022079.2-201ENST00000619739 566 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOAP06340 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 AL031595.2-201ENST00000624215 19071 ntBASIC5.83□□□□□ -1.48
HLA-DOAP06340 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DOAP06340 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 SNORA73.1-201ENST00000363107 205 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 RNU6-398P-201ENST00000384143 109 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 MIR298-201ENST00000401212 88 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC114755.2-201ENST00000413520 361 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC119751.6-201ENST00000416712 186 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 NRBF2P3-201ENST00000432731 865 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC096638.2-201ENST00000434965 711 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 ATP5C1P1-201ENST00000441945 895 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AL353898.1-201ENST00000444055 238 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 MTND1P29-201ENST00000448112 647 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC010733.1-201ENST00000451515 401 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 OR52E3P-201ENST00000452083 936 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC092691.2-201ENST00000461787 803 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOAP06340 OR2A20P-203ENST00000498397 1268 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC093890.1-201ENST00000502554 540 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 GOLGA5P1-201ENST00000507317 980 ntBASIC5.82□□□□□ -1.48
HLA-DOAP06340 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DOAP06340 AL117351.2-201ENST00000513571 157 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms