Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AL139286.1-201ENST00000604465 483 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 MIR432-201ENST00000606207 94 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AL022401.1-201ENST00000619498 108 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC099494.2-201ENST00000623371 978 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 BMS1P21-201ENST00000634565 365 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 OR52B5P-202ENST00000641118 1110 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC006971.1-201ENST00000407916 4486 ntBASIC3.4□□□□□ -1.86
HLA-DQA1P01909 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQA1P01909 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.4□□□□□ -1.86
HLA-DQA1P01909 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQA1P01909 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 RPL23P2-201ENST00000320371 421 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 RNA5SP183-201ENST00000362452 119 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 U3.2-201ENST00000362981 210 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 RNU6-984P-201ENST00000363236 109 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 RNU6-171P-201ENST00000384354 107 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 GLULP6-201ENST00000399502 913 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 DDX39BP1-205ENST00000422507 192 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 OR6K4P-201ENST00000423179 955 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AL445528.1-201ENST00000426330 420 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 NDUFA5P10-201ENST00000432147 357 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC243772.1-201ENST00000451620 410 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 RPL10P17-201ENST00000453852 316 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 OR2AF1P-201ENST00000454899 889 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC079841.1-201ENST00000481228 950 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 RN7SL809P-201ENST00000482040 297 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 PGBD4P4-201ENST00000509673 613 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC147055.3-201ENST00000510547 851 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 HMGB1P47-201ENST00000511281 589 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 HIGD1AP18-201ENST00000520730 278 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 PHBP17-201ENST00000528576 541 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC092490.3-201ENST00000545370 572 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 OR1F2P-201ENST00000570470 933 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC095055.1-201ENST00000603472 1113 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC103792.1-201ENST00000603591 919 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 HMGB1P50-201ENST00000605814 607 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AC009163.6-201ENST00000612367 342 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 AL627171.1-201ENST00000618845 1308 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 MAPK10-263ENST00000641052 4307 ntBASIC3.4□□□□□ -1.87
HLA-DQA1P01909 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1P01909 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 C4BPAP1-201ENST00000415474 1893 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 RNA5SP455-201ENST00000365190 119 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 RPL26P37-201ENST00000411983 438 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 RPS26P13-201ENST00000419030 330 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 CDY14P-201ENST00000431260 1014 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 TRIM60P13-201ENST00000432350 1283 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 CDY12P-201ENST00000440679 1015 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AL357520.1-201ENST00000441557 453 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms