Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 RNU4-40P-201ENST00000364351 143 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 SNORD116-2-201ENST00000384274 95 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 Y_RNA.465-201ENST00000384293 102 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 SNORD116-6-201ENST00000384711 96 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 MIR16-1-201ENST00000385271 89 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AL049545.1-201ENST00000401856 572 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 GAPDHP58-201ENST00000438477 1006 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 RPL23AP76-201ENST00000441860 458 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 GAPDHP25-201ENST00000447061 1001 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC243772.1-201ENST00000451620 410 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC245028.2-201ENST00000458673 253 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 RN7SL189P-201ENST00000468631 289 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC090638.1-201ENST00000498296 909 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 COX6B1P6-201ENST00000522347 255 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AL359219.2-201ENST00000555184 348 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC006349.1-201ENST00000555526 235 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC015720.2-201ENST00000567709 334 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AL354943.1-201ENST00000572103 781 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 MTCYBP13-201ENST00000578634 1093 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 BPTFP1-201ENST00000579209 492 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC090312.2-201ENST00000582687 378 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 NTAN1P1-201ENST00000603150 646 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC009597.2-201ENST00000604659 592 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AP000676.3-201ENST00000623299 569 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AC116563.2-201ENST00000624751 535 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 SGO1P1-201ENST00000603525 1447 ntBASIC4.71□□□□□ -1.66
HLA-DQA2P01906 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA2P01906 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 AC009313.2-201ENST00000417893 1941 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 TCP11X1-202ENST00000622971 1372 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 AC096656.1-201ENST00000623826 1364 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 FAM133CP-201ENST00000332869 704 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 RNU6-249P-201ENST00000363016 102 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 Y_RNA.192-201ENST00000363977 102 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 RN7SKP292-201ENST00000365522 317 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 MIR621-201ENST00000384919 96 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 RNA5SP487-201ENST00000410186 122 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 RNU2-6P-201ENST00000411404 190 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 AC234782.4-201ENST00000417646 1048 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 RPL7P4-203ENST00000430239 730 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 GTF2IP7-202ENST00000436677 309 ntBASIC4.7□□□□□ -1.66
HLA-DQA2P01906 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA2P01906 AC093155.1-201ENST00000440164 826 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms