Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC009237.13-201ENST00000603193 276 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM38O00635 AL160237.3-201ENST00000604114 1013 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 BNIP3P4-201ENST00000604946 565 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 AC109583.2-201ENST00000617367 129 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AL035461.2-201ENST00000619201 524 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC109454.4-201ENST00000623411 649 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 CDRT1-208ENST00000630868 794 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AL121594.5-201ENST00000631724 573 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC017104.5-201ENST00000637647 639 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC131971.1-201ENST00000332881 1482 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC019072.1-201ENST00000604535 1551 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM38O00635 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 ADAM5-202ENST00000399789 1942 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC073136.1-201ENST00000449426 2884 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM38O00635 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
TRIM38O00635 STX3-208ENST00000641815 3236 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
TRIM38O00635 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 AL078621.3-201ENST00000623707 2042 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC023421.1-201ENST00000590535 1785 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM38O00635 RNU6-353P-201ENST00000364266 108 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 RNU1-43P-201ENST00000365052 165 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 DUTP5-201ENST00000406790 469 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM38O00635 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 SRSF1P1-201ENST00000424058 520 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM38O00635 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM38O00635 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 AC092013.1-201ENST00000438795 332 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM38O00635 SETD6P1-201ENST00000444575 317 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 AL929288.2-201ENST00000446368 407 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 IGBP1P3-201ENST00000447449 1000 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AL596266.1-201ENST00000448132 400 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 RPL10P17-201ENST00000453852 316 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AZGP1P2-201ENST00000454506 345 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AL389915.2-201ENST00000454576 441 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 RNU7-140P-201ENST00000459546 60 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 RN7SL97P-201ENST00000486780 299 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AL035404.1-201ENST00000497982 568 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 SNRPCP2-201ENST00000504370 475 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 IGKV2-36-201ENST00000519999 223 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM38O00635 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 HMGB1P40-201ENST00000525121 540 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 MTCYBP23-201ENST00000558717 1102 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM38O00635 CYP2C60P-201ENST00000566088 139 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC127024.5-201ENST00000580085 462 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 MTCO2P2-201ENST00000591258 225 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 PART1_2.1-201ENST00000612397 250 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC243654.2-201ENST00000612843 443 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM38O00635 AC009090.3-201ENST00000616553 565 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC023509.5-201ENST00000617434 807 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC091932.2-201ENST00000623014 291 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AP002791.1-201ENST00000623291 381 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 AC092184.1-201ENST00000625042 715 ntBASIC5.35□□□□□ -1.55
TRIM38O00635 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms