Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UPK1AO00322 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.09□□□□□ -1.76
UPK1AO00322 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1AO00322 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1AO00322 OR5P1P-201ENST00000299512 925 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
UPK1AO00322 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.08□□□□□ -1.76
UPK1AO00322 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1AO00322 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
UPK1AO00322 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1AO00322 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.08□□□□□ -1.76
UPK1AO00322 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1AO00322 YWHAEP5-201ENST00000431545 765 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 RPL23AP89-201ENST00000439324 255 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 MTND6P18-201ENST00000439477 513 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 SBDSP1-204ENST00000453858 737 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.08□□□□□ -1.76
UPK1AO00322 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 RPL35AP15-201ENST00000468042 339 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 AC007686.1-201ENST00000488511 463 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.08□□□□□ -1.76
UPK1AO00322 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.08□□□□□ -1.76
UPK1AO00322 RPS27AP18-201ENST00000515536 459 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 AF186190.1-201ENST00000517470 480 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 AP002981.1-201ENST00000517692 975 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
UPK1AO00322 OR5BC1P-201ENST00000529327 739 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.08□□□□□ -1.76
UPK1AO00322 AC018555.1-201ENST00000567548 1980 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.08□□□□□ -1.76
UPK1AO00322 AC004948.1-201ENST00000609858 672 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 AL159169.2-201ENST00000610061 1269 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
UPK1AO00322 AC233309.1-201ENST00000619522 751 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.08□□□□□ -1.76
UPK1AO00322 FP325313.1-201ENST00000638228 703 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.08□□□□□ -1.76
UPK1AO00322 MFSD8-242ENST00000641690 4199 ntBASIC4.08□□□□□ -1.76
UPK1AO00322 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
UPK1AO00322 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1AO00322 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
UPK1AO00322 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
UPK1AO00322 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1AO00322 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UPK1AO00322 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
UPK1AO00322 AL137100.1-201ENST00000556703 1620 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.07□□□□□ -1.76
UPK1AO00322 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UPK1AO00322 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
UPK1AO00322 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
UPK1AO00322 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
UPK1AO00322 OR10J6P-201ENST00000289731 930 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AC010132.2-201ENST00000295493 1043 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 RNA5SP513-201ENST00000364648 118 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
UPK1AO00322 ATP5F1P2-201ENST00000398143 760 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AC097374.1-203ENST00000400783 485 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 AC013470.3-201ENST00000420252 1194 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 GSTA7P-201ENST00000438425 448 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 RN7SL585P-201ENST00000470538 280 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 RPS29P22-201ENST00000472363 168 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 OR9N1P-201ENST00000491296 333 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 RPS6P4-201ENST00000494693 758 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AC108145.1-201ENST00000503770 153 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.07□□□□□ -1.76
UPK1AO00322 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.07□□□□□ -1.76
UPK1AO00322 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 OR8G5-201ENST00000524943 1041 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UPK1AO00322 AC107918.3-201ENST00000533272 382 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 DUX4L52-201ENST00000549363 777 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AL352979.3-201ENST00000553515 247 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.07□□□□□ -1.76
UPK1AO00322 AC021483.2-201ENST00000567415 758 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.07□□□□□ -1.76
UPK1AO00322 AC068790.5-201ENST00000602741 355 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AC096553.1-201ENST00000605169 829 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AL021997.2-201ENST00000615674 271 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 AL158062.1-201ENST00000619632 745 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
UPK1AO00322 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
UPK1AO00322 THAP12P8-201ENST00000447914 2115 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UPK1AO00322 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UPK1AO00322 AC006971.1-201ENST00000407916 4486 ntBASIC4.07□□□□□ -1.76
UPK1AO00322 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
UPK1AO00322 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.06□□□□□ -1.76
UPK1AO00322 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPK1AO00322 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPK1AO00322 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.06□□□□□ -1.76
UPK1AO00322 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms