Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 Z73965.1-201ENST00000623412 2297 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
PDLIM1O00151 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PDLIM1O00151 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDLIM1O00151 RNU6-1279P-201ENST00000383917 103 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 RNU6-883P-201ENST00000384597 107 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 ARL4AP5-201ENST00000404372 599 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.49□□□□□ -1.69
PDLIM1O00151 BTF3P9-201ENST00000418784 283 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 ELOCP18-201ENST00000434209 337 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 Z99127.2-201ENST00000441426 334 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 BTBD7P2-201ENST00000441962 620 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 EXTL2P1-201ENST00000446218 416 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.49□□□□□ -1.69
PDLIM1O00151 FABP3P2-201ENST00000453169 399 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 RPL21P71-201ENST00000465598 459 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 RN7SL329P-201ENST00000467740 299 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC021205.1-201ENST00000468797 348 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC012158.1-204ENST00000483430 465 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 HMGN2P25-201ENST00000486956 268 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC004453.1-201ENST00000487895 408 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC090543.1-201ENST00000492168 485 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.49□□□□□ -1.69
PDLIM1O00151 AC021087.2-201ENST00000504656 1203 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC098799.1-201ENST00000504752 800 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM1O00151 AC004980.4-201ENST00000513375 203 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC015795.1-201ENST00000513669 327 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 RN7SKP66-201ENST00000516681 231 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 RN7SKP260-201ENST00000516907 149 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 Y_RNA.719-201ENST00000517156 106 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 RNU6-709P-201ENST00000517257 104 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 DEFB109D-201ENST00000529497 240 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC092851.1-201ENST00000535964 478 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC087888.1-201ENST00000550884 1254 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.49□□□□□ -1.69
PDLIM1O00151 AC051619.2-201ENST00000559063 397 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM1O00151 AC209154.1-201ENST00000582156 337 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.49□□□□□ -1.69
PDLIM1O00151 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC005021.1-201ENST00000608730 355 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC093799.2-201ENST00000610062 578 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 AC003001.2-201ENST00000616294 831 ntBASIC4.49□□□□□ -1.69
PDLIM1O00151 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM1O00151 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM1O00151 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM1O00151 HSPD1P14-201ENST00000432666 1618 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM1O00151 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM1O00151 SNORA58B-201ENST00000364259 136 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM1O00151 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AC006065.1-201ENST00000422539 802 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC006455.6-201ENST00000426192 893 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 LYPLA1P1-201ENST00000434514 622 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC093716.1-201ENST00000435923 377 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 RPL34P20-201ENST00000442771 351 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 CEACAMP7-201ENST00000444105 496 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AC000111.2-201ENST00000448200 210 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AL627224.1-201ENST00000448334 444 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AC108022.1-201ENST00000493466 478 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC147055.3-201ENST00000510547 851 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM1O00151 RNU6-889P-201ENST00000517189 103 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM1O00151 FKBP1BP1-201ENST00000553366 325 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM1O00151 EIF1P5-201ENST00000585002 234 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AC008759.1-201ENST00000589783 983 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AL133247.2-201ENST00000603236 482 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 MTCO2P22-201ENST00000603246 681 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC084373.1-201ENST00000603311 235 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AC233309.1-201ENST00000619522 751 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 AL359757.1-201ENST00000623176 255 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM1O00151 AC008758.3-201ENST00000507003 1829 ntBASIC4.48□□□□□ -1.69
PDLIM1O00151 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM1O00151 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms